Mercurial > repos > genouest > braker

diff job_conf_braker3.xml @ 2:cf241e076f7b draft

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planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit be0db9109388c0660c9f901f6b7129c0e3e5105c
author genouest
date Tue, 05 Sep 2023 09:40:27 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/job_conf_braker3.xml	Tue Sep 05 09:40:27 2023 +0000
@@ -0,0 +1,20 @@
+<!-- Adapt the paths to your install of GeneMark and ProtHint, then run planemo with the job_config_file option -->
+<job_conf>
+    <plugins>
+        <plugin id="planemo_runner" type="runner" load="galaxy.jobs.runners.local:LocalJobRunner" workers="4"/>
+    </plugins>
+    <handlers>
+    </handlers>
+    <destinations default="planemo_dest">
+        <destination id="planemo_dest" runner="planemo_runner">
+            <env id="GENEMARK_PATH">/home/abretaud/softs/etp.for_braker/bin/</env>
+            <env id="PROTHINT_PATH">/home/abretaud/softs/etp.for_braker/bin/gmes/ProtHint/bin/</env>
+        </destination>
+        <destination id="upload_dest" runner="planemo_runner">
+            <param id="docker_enabled">false</param>
+        </destination>
+    </destinations>
+    <tools>
+        <tool id="upload1" destination="upload_dest" />
+    </tools>
+</job_conf>