Mercurial > repos > genouest > braker3
annotate job_conf_braker3.xml @ 6:ea8c29a71a76 draft
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit ede1a2baa1c400c713a22d625855c1e9b6c25eea
author | genouest |
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date | Wed, 21 Feb 2024 08:36:24 +0000 |
parents | 3c0865d1172f |
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3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
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1 <!-- Adapt the paths to your install of GeneMark and ProtHint, then run planemo with the job_config_file option --> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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2 <job_conf> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
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3 <plugins> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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4 <plugin id="planemo_runner" type="runner" load="galaxy.jobs.runners.local:LocalJobRunner" workers="4"/> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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5 </plugins> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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6 <handlers> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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7 </handlers> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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8 <destinations default="planemo_dest"> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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9 <destination id="planemo_dest" runner="planemo_runner"> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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10 <env id="GENEMARK_PATH">/home/abretaud/softs/etp.for_braker/bin/</env> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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11 <env id="PROTHINT_PATH">/home/abretaud/softs/etp.for_braker/bin/gmes/ProtHint/bin/</env> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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12 </destination> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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13 <destination id="upload_dest" runner="planemo_runner"> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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14 <param id="docker_enabled">false</param> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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15 </destination> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
parents:
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16 </destinations> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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17 <tools> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
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18 <tool id="upload1" destination="upload_dest" /> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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19 </tools> |
3c0865d1172f
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6e73c0417506d93c905b4aeb77d92350b662fbb
genouest
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20 </job_conf> |