# HG changeset patch
# User genouest
# Date 1737024043 0
# Node ID a9b0b926e1338993cbb22817f92bd52ab0bc2a72
# Parent  c42bf6424ba42d21c863b54e13addd7f478a62a0
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6f7fd50bc001327f69d5391d236aecba0eb64b3

diff -r c42bf6424ba4 -r a9b0b926e133 braker3.xml
--- a/braker3.xml	Tue Mar 19 09:00:36 2024 +0000
+++ b/braker3.xml	Thu Jan 16 10:40:43 2025 +0000
@@ -112,7 +112,7 @@
 
         <section name="advanced" expanded="false" title="Advanced">
             <!--param argument="-\-UTR" type="boolean" checked="false" truevalue="-\-UTR=on" falsevalue="" label="" help="Experimental, requires RNASeq data (bam) and a softmasked genome" /-->
-            <param argument="--filterOutShort" type="boolean" checked="false" truevalue="--filterOutShort" falsevalue="" label="Filter out too short traingin gene predicted by GeneMark-EX" />
+            <param argument="--filterOutShort" type="boolean" checked="false" truevalue="--filterOutShort" falsevalue="" label="Filter out too short training gene predicted by GeneMark-EX" />
             <param argument="--eval" type="data" format="gtf" optional="true" label="Reference set to evaluate predictions" help="using evaluation scripts from GaTech" />
             <param argument="--eval_pseudo" type="data" format="gff3" optional="true" label="File with pseudogenes that will be excluded from accuracy evaluation" />
             <param argument="--alternatives-from-evidence" type="boolean" checked="true" truevalue="--alternatives-from-evidence=true" falsevalue="--alternatives-from-evidence=false" label="Output alternative transcripts based on explicit evidence from hints"/>