Mercurial > repos > genouest > braker3
changeset 8:a9b0b926e133 draft default tip
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/braker commit d6f7fd50bc001327f69d5391d236aecba0eb64b3
| author | genouest |
|---|---|
| date | Thu, 16 Jan 2025 10:40:43 +0000 |
| parents | c42bf6424ba4 |
| children | |
| files | braker3.xml |
| diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/braker3.xml Tue Mar 19 09:00:36 2024 +0000 +++ b/braker3.xml Thu Jan 16 10:40:43 2025 +0000 @@ -112,7 +112,7 @@ <section name="advanced" expanded="false" title="Advanced"> <!--param argument="-\-UTR" type="boolean" checked="false" truevalue="-\-UTR=on" falsevalue="" label="" help="Experimental, requires RNASeq data (bam) and a softmasked genome" /--> - <param argument="--filterOutShort" type="boolean" checked="false" truevalue="--filterOutShort" falsevalue="" label="Filter out too short traingin gene predicted by GeneMark-EX" /> + <param argument="--filterOutShort" type="boolean" checked="false" truevalue="--filterOutShort" falsevalue="" label="Filter out too short training gene predicted by GeneMark-EX" /> <param argument="--eval" type="data" format="gtf" optional="true" label="Reference set to evaluate predictions" help="using evaluation scripts from GaTech" /> <param argument="--eval_pseudo" type="data" format="gff3" optional="true" label="File with pseudogenes that will be excluded from accuracy evaluation" /> <param argument="--alternatives-from-evidence" type="boolean" checked="true" truevalue="--alternatives-from-evidence=true" falsevalue="--alternatives-from-evidence=false" label="Output alternative transcripts based on explicit evidence from hints"/>