diff test-data/feelnc_lncRNA.gtf @ 0:e323c49b8bcc draft

planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/feelnc2asko commit 92849224db1963d090fbb25d410cc659a5449241
author genouest
date Thu, 12 Apr 2018 06:05:23 -0400
parents
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/feelnc_lncRNA.gtf	Thu Apr 12 06:05:23 2018 -0400
@@ -0,0 +1,28 @@
+GL349622	Cufflinks	exon	533485	533534	882	-	.	gene_id "CUFF.85"; transcript_id "CUFF.85.2"; FPKM "2.3945340028"; conf_hi "2.630871"; conf_lo "2.158197"; cov "214.763323"; exon_number "1"; frac "0.489040";
+GL349622	Cufflinks	exon	533586	533675	882	-	.	gene_id "CUFF.85"; transcript_id "CUFF.85.2"; FPKM "2.3945340028"; conf_hi "2.630871"; conf_lo "2.158197"; cov "214.763323"; exon_number "2"; frac "0.489040";
+GL349622	Cufflinks	exon	535570	536159	882	-	.	gene_id "CUFF.85"; transcript_id "CUFF.85.2"; FPKM "2.3945340028"; conf_hi "2.630871"; conf_lo "2.158197"; cov "214.763323"; exon_number "3"; frac "0.489040";
+GL349622	Cufflinks	exon	490324	490331	1000	-	.	gene_id "CUFF.85"; transcript_id "CUFF.85.1"; FPKM "2.7134838239"; conf_hi "2.976733"; conf_lo "2.450235"; cov "243.369608"; exon_number "1"; frac "0.510960";
+GL349622	Cufflinks	exon	531740	531830	1000	-	.	gene_id "CUFF.85"; transcript_id "CUFF.85.1"; FPKM "2.7134838239"; conf_hi "2.976733"; conf_lo "2.450235"; cov "243.369608"; exon_number "2"; frac "0.510960";
+GL349622	Cufflinks	exon	535570	536159	1000	-	.	gene_id "CUFF.85"; transcript_id "CUFF.85.1"; FPKM "2.7134838239"; conf_hi "2.976733"; conf_lo "2.450235"; cov "243.369608"; exon_number "3"; frac "0.510960";
+GL349622	Cufflinks	exon	604709	604997	1000	-	.	gene_id "CUFF.110"; transcript_id "CUFF.110.1"; FPKM "0.0961002126"; conf_hi "0.135302"; conf_lo "0.056899"; cov "8.912035"; exon_number "1"; frac "1.000000";
+GL349622	Cufflinks	exon	609022	609482	1000	-	.	gene_id "CUFF.110"; transcript_id "CUFF.110.1"; FPKM "0.0961002126"; conf_hi "0.135302"; conf_lo "0.056899"; cov "8.912035"; exon_number "2"; frac "1.000000";
+GL349622	Cufflinks	exon	1160606	1160686	1000	-	.	gene_id "CUFF.350"; transcript_id "CUFF.350.1"; FPKM "0.1406859378"; conf_hi "0.225523"; conf_lo "0.055849"; cov "12.977983"; exon_number "1"; frac "1.000000";
+GL349622	Cufflinks	exon	1160750	1161032	1000	-	.	gene_id "CUFF.350"; transcript_id "CUFF.350.1"; FPKM "0.1406859378"; conf_hi "0.225523"; conf_lo "0.055849"; cov "12.977983"; exon_number "2"; frac "1.000000";
+GL349622	Cufflinks	exon	218384	218748	1000	-	.	gene_id "CUFF.77"; transcript_id "CUFF.77.1"; FPKM "0.0743883680"; conf_hi "0.114151"; conf_lo "0.034626"; cov "6.927126"; exon_number "1"; frac "1.000000";
+GL349622	Cufflinks	exon	219422	219582	1000	-	.	gene_id "CUFF.77"; transcript_id "CUFF.77.1"; FPKM "0.0743883680"; conf_hi "0.114151"; conf_lo "0.034626"; cov "6.927126"; exon_number "2"; frac "1.000000";
+GL349622	Cufflinks	exon	219650	219722	1000	-	.	gene_id "CUFF.77"; transcript_id "CUFF.77.1"; FPKM "0.0743883680"; conf_hi "0.114151"; conf_lo "0.034626"; cov "6.927126"; exon_number "3"; frac "1.000000";
+GL349622	Cufflinks	exon	2021789	2021806	518	-	.	gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "1"; frac "0.530904";
+GL349622	Cufflinks	exon	2021900	2022107	518	-	.	gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "2"; frac "0.530904";
+GL349622	Cufflinks	exon	2022183	2022321	518	-	.	gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "3"; frac "0.530904";
+GL349622	Cufflinks	exon	2022426	2022632	518	-	.	gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "4"; frac "0.530904";
+GL349622	Cufflinks	exon	2022873	2023046	518	-	.	gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "5"; frac "0.530904";
+GL349622	Cufflinks	exon	2023146	2024788	518	-	.	gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "6"; frac "0.530904";
+GL349622	Cufflinks	exon	2024861	2025119	518	-	.	gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "7"; frac "0.530904";
+GL349622	Cufflinks	exon	2025186	2025371	518	-	.	gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "8"; frac "0.530904";
+GL349622	Cufflinks	exon	2025439	2025624	518	-	.	gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "9"; frac "0.530904";
+GL349622	Cufflinks	exon	2025689	2025775	518	-	.	gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "10"; frac "0.530904";
+GL349622	Cufflinks	exon	2025850	2026165	518	-	.	gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "11"; frac "0.530904";
+GL349622	Cufflinks	exon	1359442	1359624	1000	-	.	gene_id "CUFF.491"; transcript_id "CUFF.491.1"; FPKM "0.0739312720"; conf_hi "0.114941"; conf_lo "0.032922"; cov "7.121265"; exon_number "1"; frac "1.000000";
+GL349622	Cufflinks	exon	1359763	1360152	1000	-	.	gene_id "CUFF.491"; transcript_id "CUFF.491.1"; FPKM "0.0739312720"; conf_hi "0.114941"; conf_lo "0.032922"; cov "7.121265"; exon_number "2"; frac "1.000000";
+GL349622	Cufflinks	exon	400758	401861	1000	-	.	gene_id "CUFF.80"; transcript_id "CUFF.80.1"; FPKM "0.0766645216"; conf_hi "0.102680"; conf_lo "0.050649"; cov "6.048173"; exon_number "1"; frac "1.000000";
+GL349622	Cufflinks	exon	405167	405243	1000	-	.	gene_id "CUFF.80"; transcript_id "CUFF.80.1"; FPKM "0.0766645216"; conf_hi "0.102680"; conf_lo "0.050649"; cov "6.048173"; exon_number "2"; frac "1.000000";