diff miranda2asko.xml @ 0:3f6cdc878f35 draft

planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/miranda2asko commit bd6737d0fba64ed6e7d3be5267868942674696ea
author genouest
date Thu, 12 Apr 2018 10:53:04 -0400
parents
children 605bb64c2668
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/miranda2asko.xml	Thu Apr 12 10:53:04 2018 -0400
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+<tool id="miranda2asko" name="Convert miRanda output to tabular" version="0.1">
+    <description>for AskOmics</description>
+    <requirements>
+        <requirement type="package" version="5.22.2.1">perl</requirement>
+    </requirements>
+
+    <command detect_errors="exit_code"><![CDATA[
+        perl '$__tool_directory__/miranda2asko.pl' '${miranda}' > '${mirasko}'
+    ]]></command>
+
+    <inputs>
+        <param format="tsv" name="miranda" type="data" label="miRanda output" />
+    </inputs>
+
+    <outputs>
+        <data format="tsv" name="mirasko" label="${tool.name} on ${on_string} : AskOmics miRanda output" />
+    </outputs>
+
+    <tests>
+        <test>
+            <param name="miranda" ftype="tsv" value="miranda.out" />
+            <output name="mirasko" ftype="tsv" file="miranda.asko.out" compare="sim_size" />
+        </test>
+    </tests>
+
+    <help>
+        Generates a TSV compliant to AskOmics from the miRanda output.
+    </help>
+
+    <citations>
+    </citations>
+</tool>