Mercurial > repos > genouest > peptimapper_clust_to_gff
changeset 1:8ef59dde4389 draft default tip
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/peptimapper commit 040d09319fb0f43fafb1d3ebd99af41bce0f6bfd
| author | genouest |
|---|---|
| date | Thu, 18 Jul 2024 10:26:15 +0000 |
| parents | 691d8f3aeb1a |
| children | |
| files | clust_to_gff.xml |
| diffstat | 1 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/clust_to_gff.xml Fri Dec 10 10:34:56 2021 +0000 +++ b/clust_to_gff.xml Thu Jul 18 10:26:15 2024 +0000 @@ -1,7 +1,7 @@ -<tool id="peptimapper_clust_to_gff" name="ClustToGFF" version="2.0"> +<tool id="peptimapper_clust_to_gff" name="ClustToGFF" version="2.1"> <description>add clusters locations into GFF files to be integrated into a genome viewer</description> <requirements> - <container type="docker">dockerprotim/peptimapper</container> + <container type="docker">dockerprotim/peptimapper@sha256:d3eb807d7d5aa155f7b39d05a47420e0a0a9191d5fa867b6ca1be763f8a23bf1</container> </requirements> <command detect_errors="exit_code"><![CDATA[ unzip '${gffdir}' -d gff && @@ -13,7 +13,7 @@ ]]></command> <inputs> <param name="clustersfile" type="data" format="txt" label="Clusters file" help="Clusters file generated by PepMatch" /> - <param name="gffdir" type="data" label="GFF files repository" help="Zipped repository containing all organism GFF files" /> + <param name="gffdir" type="data" format="zip" label="GFF files repository" help="Zipped repository containing all organism GFF files" /> </inputs> <outputs> <data name="gfffiles" format="zip" label="GFF files including clusters locations" /> @@ -22,7 +22,7 @@ <test> <param name="clustersfile" value="clusttogff/Gamete.5.3.2.5000.clust"/> <param name="gffdir" value="clusttogff/gff3_files_repository.zip"/> - <output name="output" file="clusttogff/out.zip" compare="sim_size"/> + <output name="gfffiles" file="clusttogff/out.zip" compare="sim_size"/> </test> </tests> <help><![CDATA[