diff test-data/lefse_input @ 0:e7cd19afda2e draft

Lefse
author george-weingart
date Tue, 13 May 2014 21:57:00 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/lefse_input	Tue May 13 21:57:00 2014 -0400
@@ -0,0 +1,340 @@
+class	truc	truc	truc	truc	truc	truc	truc	truc	truc	truc	truc	truc	truc	truc	truc	truc	truc	truc	truc	truc	rag2	rag2	rag2	rag2	rag2	rag2	rag2	rag2	rag2	rag2
+Archaea	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
+Archaea|Crenarchaeota	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
+Archaea|Crenarchaeota|Thermoprotei	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
+Archaea|Crenarchaeota|Thermoprotei|Desulfurococcales	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
+Archaea|Crenarchaeota|Thermoprotei|Sulfolobales	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
+Archaea|Crenarchaeota|Thermoprotei|Sulfolobales|Sulfolobaceae	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
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+Archaea|Euryarchaeota|Halobacteria|Halobacteriales	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
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+Bacteria|Actinobacteria	0.0723240115718	0.0880281690141	0.121369042803	0.232045480914	0.134305448964	0.307258993727	0.044999437507	0.0422535211268	0.773313115997	0.0410846343468	0.130690481377	0.733272227314	1.31532172058	0.882723833544	0.653480874793	0.871003307607	0.308641975309	0.278113663845	0.172837260075	0.173535791757	2.95680742101	1.84829991282	10.3033856075	2.51572327044	14.4195034934	2.75295822265	14.2857142857	0.489669174728	13.449589096	0.0828386027889
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+Bacteria|Actinobacteria|Actinobacteria|Acidimicrobiales|Acidimicrobiaceae	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
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+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Corynebacteriaceae	0.0241080038573	0.0195618153365	0.00809126952019	0.0116022740457	0.0	0.0128024580719	0.0	0.0	0.0	0.0	0.0217817468961	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.027290093696	0.0	0.0	0.0	0.0	0.0193517174649	0.0	0.0	0.0113830392715	0.0	0.0	0.0138064337981
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+Bacteria|Actinobacteria|Actinobacteria|Actinomycetales|Micrococcaceae|Sinomonas	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
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+Bacteria|Actinobacteria|Actinobacteria|Bifidobacteriales|Bifidobacteriaceae	0.0	0.00978090766823	0.0	0.0116022740457	0.0287797390637	0.0768147484317	0.0	0.0140845070423	0.151630022745	0.0	0.0217817468961	0.348304307974	0.829482166133	0.517023959647	0.0784177049752	0.0882028665932	0.0	0.0	0.027290093696	0.0108459869848	2.84085418881	1.74367916303	10.2154477503	2.38993710692	14.1667905456	2.58391692828	13.9669891861	0.370237668697	13.2892363199	0.0138064337981
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+Bacteria|Actinobacteria|Actinobacteria|Coriobacteriales|Coriobacteriaceae	0.0482160077146	0.0586854460094	0.113277773283	0.174034110686	0.1055257099	0.217641787223	0.0337495781303	0.0281690140845	0.621683093252	0.0410846343468	0.0871269875844	0.38496791934	0.48583955445	0.365699873897	0.575063169818	0.782800441014	0.308641975309	0.278113663845	0.118257072683	0.162689804772	0.115953232196	0.104620749782	0.0879378572475	0.106434446057	0.237847480303	0.0724462690171	0.30734206033	0.119431506031	0.140308679094	0.0552257351926
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+Bacteria|Bacteroidetes|Sphingobacteria|Sphingobacteriales|Chitinophagaceae	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
+Bacteria|Bacteroidetes|Sphingobacteria|Sphingobacteriales|Chitinophagaceae|Sediminibacterium	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Faecalibacterium	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0261392349917	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Lactonifactor	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Oscillibacter	0.964320154291	0.635758998435	0.890039647221	1.29945469312	1.17037605526	1.4594802202	0.618742265722	0.774647887324	0.576194086429	0.636811832375	0.588107166195	0.733272227314	0.959829363669	1.03404791929	0.853881676396	1.10253583241	2.27996814018	3.42200725514	0.673155644501	0.911062906725	0.502464006184	0.435919790759	0.908691191558	0.70633768747	0.0743273375948	0.869355228206	1.10415480933	0.394123969903	0.380837843255	1.13212757145
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Ruminococcus	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0126103404792	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0138064337981
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+Bacteria|Firmicutes|Clostridia|Clostridiales|Ruminococcaceae|Subdoligranulum	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.00871307833057	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
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+Bacteria|Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Kluyvera	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
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+Bacteria|Proteobacteria|Gammaproteobacteria|Thiotrichales	0.0482160077146	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
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