Mercurial > repos > george-weingart > metaphlan
diff tool_dependencies.xml @ 0:921c5be02e81 draft
Metaphlan
author | george-weingart |
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date | Tue, 13 May 2014 21:54:35 -0400 |
parents | |
children | eb47f6bbd2e5 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Tue May 13 21:54:35 2014 -0400 @@ -0,0 +1,27 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="metaphlan" version="1.7.0"> + <install version="1.0"> + <actions> + <action type="shell_command">hg clone https://bitbucket.org/nsegata/metaphlan</action> + <action type="move_directory_files"> + <source_directory>.</source_directory> + <destination_directory>$INSTALL_DIR</destination_directory> + </action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> + </action> + <action type="set_environment"> + <environment_variable name="METAPHLAN_PATH" action="set_to">$INSTALL_DIR</environment_variable> + </action> + + </actions> + </install> + <readme> +These links provide information for the metaphlan package: +http://huttenhower.sph.harvard.edu/metaphlan +https://groups.google.com/forum/#!forum/metaphlan-users + </readme> + </package> +</tool_dependency> +