annotate src/breadcrumbs/docs/PCL-Description.txt @ 0:2f4f6f08c8c4 draft

Uploaded
author george-weingart
date Tue, 13 May 2014 21:58:57 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
1 Although this example is delimited with spaces for consistent visualization, in a PCL file each element would be delimited by one tab.
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
2
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
3 Here is an example of a very small PCL file.
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
4
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
5 ID Kingdom Genus Sample 1 Sample 2
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
6 Cohort NA NA Test Control
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
7 Age NA NA 34 43
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
8 1232 Bacteria Bacteroides .23 .16
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
9 543 Bacteria Dorea .001 .0021
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
10
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
11 These are the different parts of the PCL file.
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
12
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
13 ID Feature metadata ID Last feature metadata ID sample ID sample ID
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
14 Metadata ID NA NA sample metadata sample metadata
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
15 Last metadata ID NA NA sample metadata sample metadata
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
16 Feature ID Feature (row) metadata Feature (row) metadata Data measurement Data measurement
2f4f6f08c8c4 Uploaded
george-weingart
parents:
diff changeset
17 Feature ID Feature (row) metadata Feature (row) metadata Data measurement Data measurement