Mercurial > repos > gga > apollo_fetch_jbrowse
comparison json2iframe.py @ 15:41b74ee91497 draft
"planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 7f742b16e6e4c33b9abdb633405298e05760c84b"
| author | gga |
|---|---|
| date | Tue, 08 Jun 2021 09:15:07 +0000 |
| parents | d8bb1f9b85b2 |
| children |
comparison
equal
deleted
inserted
replaced
| 14:b7c44671f012 | 15:41b74ee91497 |
|---|---|
| 20 # This is base64 encoded to get past the toolshed's filters. | 20 # This is base64 encoded to get past the toolshed's filters. |
| 21 HTML_TPL = """ | 21 HTML_TPL = """ |
| 22 <html> | 22 <html> |
| 23 <head> | 23 <head> |
| 24 <title>Embedded Apollo Access</title> | 24 <title>Embedded Apollo Access</title> |
| 25 <style type="text/css">body {{margin: 0;}} iframe {{border: 0;width: 100%;height: 100%}}</style> | 25 <style type="text/css">body {{margin: 0;}} iframe {{border: 0;width: 100%;height: 100vh}}</style> |
| 26 </head> | 26 </head> |
| 27 <body> | 27 <body> |
| 28 <iframe src="{base_url}/annotator/loadLink?loc={chrom}&organism={orgId}{tracklist}"></iframe> | 28 <iframe src="{base_url}/annotator/loadLink?loc={chrom}&organism={orgId}{tracklist}"></iframe> |
| 29 </body> | 29 </body> |
| 30 </html> | 30 </html> |
| 31 """ | 31 """ |
| 32 | 32 |
| 33 print(HTML_TPL.format(base_url=args.external_apollo_url, chrom="", orgId=data[0]['id'], tracklist='&tracklist=1' if args.tracklist else '')) | 33 if isinstance(data, list): |
| 34 print(HTML_TPL.format(base_url=args.external_apollo_url, chrom="", orgId=data[0]['id'], tracklist='&tracklist=1' if args.tracklist else '')) | |
| 35 else: | |
| 36 print(HTML_TPL.format(base_url=args.external_apollo_url, chrom="", orgId=data['id'], tracklist='&tracklist=1' if args.tracklist else '')) |