comparison webapollo.py @ 17:d91f4bc313d3 draft default tip

planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 12282c16658b37858f49944796fd95515ef0fc0b

16:654af4ba76bc

import argparse
import collections
import json
import logging
import os
import time
from abc import abstractmethod

import requests

from six.moves.builtins import next
from six.moves.builtins import object

# available in rev.                         #
# e27332bc82f4e327aedaec17c9b656ae719322ed  #
# of https://github.com/tkem/cachetools/    #
#############################################

class DefaultMapping(collections.MutableMapping):

    __slots__ = ()

    @abstractmethod
    def __contains__(self, key):  # pragma: nocover

class WebApolloInstance(object):

    def __init__(self):

        if 'ARROW_GLOBAL_CONFIG_PATH' in os.environ:

            with open(os.environ['ARROW_GLOBAL_CONFIG_PATH'], 'r') as config:
                conf = yaml.safe_load(config)
                try:
                    instance_name = conf['__default']
                except KeyError:

17:d91f4bc313d3

import argparse
import collections
import json
import logging
import os
import sys
import time
from abc import abstractmethod

if sys.version_info.major == 3 and sys.version_info.minor >= 10:
    from collections.abc import MutableMapping
else:
    from collections import MutableMapping

import requests

from six.moves.builtins import next
from six.moves.builtins import object

# available in rev.                         #
# e27332bc82f4e327aedaec17c9b656ae719322ed  #
# of https://github.com/tkem/cachetools/    #
#############################################

class DefaultMapping(MutableMapping):

    __slots__ = ()

    @abstractmethod
    def __contains__(self, key):  # pragma: nocover

class WebApolloInstance(object):

    def __init__(self):

        if 'ARROW_GLOBAL_CONFIG_PATH' in os.environ:
            with open(os.environ['ARROW_GLOBAL_CONFIG_PATH'], 'r') as config:
                conf = yaml.safe_load(config)
                try:
                    instance_name = conf['__default']
                except KeyError: