Mercurial > repos > gga > chado_analysis_add_analysis
diff analysis_add_analysis.xml @ 7:72cabf21ce8d draft
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit f5c5d81fc9781371e12b91c0d609b9201587cda5
| author | gga |
|---|---|
| date | Fri, 23 Nov 2018 11:17:19 -0500 |
| parents | faa1a435c1c0 |
| children | 11b434f48a03 |
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--- a/analysis_add_analysis.xml Mon Nov 05 12:21:00 2018 -0500 +++ b/analysis_add_analysis.xml Fri Nov 23 11:17:19 2018 -0500 @@ -1,11 +1,11 @@ <?xml version="1.0"?> <tool id="analysis_add_analysis" name="Chado analysis add" version="@WRAPPER_VERSION@.0"> - <description></description> - <macros> - <import>macros.xml</import> - </macros> - <expand macro="requirements"/> - <command detect_errors="aggressive"><![CDATA[ + <description></description> + <macros> + <import>macros.xml</import> + </macros> + <expand macro="requirements"/> + <command detect_errors="aggressive"><![CDATA[ @AUTH@ chakin analysis add_analysis @@ -32,29 +32,29 @@ | jq -S . > $results ]]></command> - <inputs> + <inputs> <!-- arguments --> - <param name="name" label="Name" argument="name" type="text" help="analysis name" /> - <param name="program" label="Program" argument="program" type="text" help="analysis program" /> - <param name="programversion" label="Programversion" argument="programversion" type="text" help="analysis programversion" /> - <param name="sourcename" label="Sourcename" argument="sourcename" type="text" help="analysis sourcename" /> + <param name="name" label="Name" argument="name" type="text" help="analysis name" /> + <param name="program" label="Program" argument="program" type="text" help="analysis program" /> + <param name="programversion" label="Programversion" argument="programversion" type="text" help="analysis programversion" /> + <param name="sourcename" label="Sourcename" argument="sourcename" type="text" help="analysis sourcename" /> <!-- options --> - <param name="algorithm" label="Algorithm" argument="algorithm" type="text" help="analysis algorithm" optional="True" /> - <param name="sourceversion" label="Sourceversion" argument="sourceversion" type="text" help="analysis sourceversion" optional="True" /> - <param name="sourceuri" label="Sourceuri" argument="sourceuri" type="text" help="analysis sourceuri" optional="True" /> - <param name="description" label="Description" argument="description" type="text" help="analysis description" optional="True" /> - <param name="date_executed" label="Date Executed" argument="date_executed" type="text" optional="True" help="analysis date_executed (yyyy-mm-dd)"> - <validator type="regex" message="Date in YYYY-MM-DD format">^[0-9]{4}-[0-9]{2}-[0-9]{2}$</validator> - </param> + <param name="algorithm" label="Algorithm" argument="--algorithm" type="text" help="analysis algorithm" optional="True" /> + <param name="sourceversion" label="Sourceversion" argument="--sourceversion" type="text" help="analysis sourceversion" optional="True" /> + <param name="sourceuri" label="Sourceuri" argument="--sourceuri" type="text" help="analysis sourceuri" optional="True" /> + <param name="description" label="Description" argument="--description" type="text" help="analysis description" optional="True" /> + <param name="date_executed" label="Date Executed" argument="--date_executed" type="text" optional="True" help="analysis date_executed (yyyy-mm-dd)"> + <validator type="regex" message="Date in YYYY-MM-DD format">^[0-9]{4}-[0-9]{2}-[0-9]{2}$</validator> + </param> - </inputs> - <outputs> - <data format="json" name="results"/> - </outputs> - <help> + </inputs> + <outputs> + <data format="json" name="results"/> + </outputs> + <help> Create an analysis @HELP@ - </help> + </help> </tool>