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view export_export_fasta.xml @ 5:4e6a87a64220 draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 3c4fb887c809face4fbe4602617d6dc094b15864
author gga
date Mon, 05 Nov 2018 07:58:28 -0500
parents 5f69e36413a4
children 2875b454d1c2
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<?xml version="1.0"?>
<tool id="export_export_fasta" name="Chado export fasta" version="@WRAPPER_VERSION@.0">
 	<description></description>
	<macros>
		<import>macros.xml</import>
	</macros>
	<expand macro="requirements"/>
    <code file="chado.py"/>
	<command detect_errors="aggressive"><![CDATA[
@AUTH@

chakin export export_fasta
'$organism'

 > $results
    ]]></command>
	<inputs>
        <!-- arguments -->
        <param argument="--organism"
               type="select"
               dynamic_options="list_organisms()"
               label="Organism" />
   	    <expand macro="wait_for"/>

	</inputs>
	<outputs>
		<data format="fasta" name="results"/>
	</outputs>
	<help>
Export reference sequences as fasta.

@HELP@
	</help>
</tool>