Mercurial > repos > gga > chado_export_export_gbk

view export_export_gbk.xml @ 6:a2d36826d1fd draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit c5b949de324bf86c88c680767e56ac77685cd14c
author gga
date Mon, 05 Nov 2018 12:14:18 -0500
parents 3ec83754aaef
children db753046224c
line wrap: on
line source

<?xml version="1.0"?>
<tool id="export_export_gbk" name="Chado export gbk" version="@WRAPPER_VERSION@.0">
 	<description></description>
	<macros>
		<import>macros.xml</import>
	</macros>
	<expand macro="requirements"/>
    <code file="chado.py"/>
	<command detect_errors="aggressive"><![CDATA[
@AUTH@

chakin export export_gbk
'$organism'


 > $results
    ]]></command>
	<inputs>
	    <!-- arguments -->
	    <param argument="--organism"
	           type="select"
	           dynamic_options="list_organisms()"
	           label="Organism" />

	    <!-- options -->
	    <expand macro="wait_for"/>

	</inputs>
	<outputs>
		<data format="genbank" name="results"/>
	</outputs>
	<help>
Export organism features as genbank

@HELP@
	</help>
</tool>