diff expression_delete_biomaterials.xml @ 0:3af5ba30d0cd draft

planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 3c4fb887c809face4fbe4602617d6dc094b15864
author gga
date Mon, 05 Nov 2018 08:05:34 -0500
parents
children 8b1250de656a
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/expression_delete_biomaterials.xml	Mon Nov 05 08:05:34 2018 -0500
@@ -0,0 +1,45 @@
+<?xml version="1.0"?>
+<tool id="expression_delete_biomaterials" name="Chado biomaterials delete" version="@WRAPPER_VERSION@.0">
+ <description></description>
+	<macros>
+		<import>macros.xml</import>
+	</macros>
+	<expand macro="requirements"/>
+    <code file="chado.py"/>
+	<command detect_errors="aggressive"><![CDATA[
+@AUTH@
+
+chakin expression delete_biomaterials
+
+#if $names:
+  --names '$names'
+#end if
+#if $ids:
+  --ids '$ids'
+#end if
+#if $organism_id:
+  --organism_id '$organism_id'
+#end if
+#if $analysis_id:
+  --analysis_id '$analysis_id'
+#end if
+ > $results
+    ]]></command>
+	<inputs>
+	    <!-- options -->
+		<param argument="organism_id" type="select" dynamic_options="list_organisms()" label="Organism" optional="true" />
+		<param argument="analysis_id" type="select" dynamic_options="list_analyses()"  label="Analysis" optional="true" />
+		<param name="names" label="Names" argument="names" type="data" format="json" help="JSON list of biomaterial names to delete." optional="true" />
+		<param name="ids" label="Ids" argument="ids" type="data" format="json" help="JSON list of biomaterial ids to delete." optional="true" />
+
+		<expand macro="wait_for"/>
+	</inputs>
+	<outputs>
+		<data format="txt" name="results"/>
+	</outputs>
+	<help>
+Will delete biomaterials based on selector. Only one selector will be used.
+
+@HELP@
+	</help>
+</tool>