view expression_delete_biomaterials.xml @ 1:662e0e3c56b4 draft

planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit c5b949de324bf86c88c680767e56ac77685cd14c

<?xml version="1.0"?>
<tool id="expression_delete_biomaterials" name="Chado biomaterials delete" version="@WRAPPER_VERSION@.0">
 <description></description>
	<macros>
		<import>macros.xml</import>
	</macros>
	<expand macro="requirements"/>
    <code file="chado.py"/>
	<command detect_errors="aggressive"><![CDATA[
@AUTH@

chakin expression delete_biomaterials

#if $names:
  --names '$names'
#end if
#if $ids:
  --ids '$ids'
#end if
#if $organism_id:
  --organism_id '$organism_id'
#end if
#if $analysis_id:
  --analysis_id '$analysis_id'
#end if
 > $results
    ]]></command>
	<inputs>
	    <!-- options -->
		<param argument="organism_id" type="select" dynamic_options="list_organisms()" label="Organism" optional="true" />
		<param argument="analysis_id" type="select" dynamic_options="list_analyses()"  label="Analysis" optional="true" />
		<param name="names" label="Names" argument="names" type="data" format="json" help="JSON list of biomaterial names to delete." optional="true" />
		<param name="ids" label="Ids" argument="ids" type="data" format="json" help="JSON list of biomaterial ids to delete." optional="true" />

		<expand macro="wait_for"/>
	</inputs>
	<outputs>
		<data format="txt" name="results"/>
	</outputs>
	<help>
Will delete biomaterials based on selector. Only one selector will be used.

@HELP@
	</help>
</tool>