Mercurial > repos > gga > genenotebook_genenotebook_build

comparison test-data/annot.gff @ 0:22f22c3e81bf draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
author gga
date Wed, 11 Jan 2023 11:49:13 +0000
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comparison
equal deleted inserted replaced
-1:000000000000 0:22f22c3e81bf
1 ##gff-version 3
2 scaffold_1 funannotate gene 300 1158 . - . ID=MMUCEDO_000001;
3 scaffold_1 funannotate mRNA 300 1158 . - . ID=MMUCEDO_000001-T1;Parent=MMUCEDO_000001;product=hypothetical protein;
4 scaffold_1 funannotate exon 880 1158 . - . ID=MMUCEDO_000001-T1.exon1;Parent=MMUCEDO_000001-T1;
5 scaffold_1 funannotate exon 407 800 . - . ID=MMUCEDO_000001-T1.exon2;Parent=MMUCEDO_000001-T1;
6 scaffold_1 funannotate exon 300 309 . - . ID=MMUCEDO_000001-T1.exon3;Parent=MMUCEDO_000001-T1;
7 scaffold_1 funannotate CDS 880 1158 . - 0 ID=MMUCEDO_000001-T1.cds;Parent=MMUCEDO_000001-T1;
8 scaffold_1 funannotate CDS 407 800 . - 0 ID=MMUCEDO_000001-T1.cds;Parent=MMUCEDO_000001-T1;
9 scaffold_1 funannotate CDS 300 309 . - 2 ID=MMUCEDO_000001-T1.cds;Parent=MMUCEDO_000001-T1;
10 scaffold_1 funannotate gene 4621 5580 . + . ID=MMUCEDO_000002;
11 scaffold_1 funannotate mRNA 4621 5580 . + . ID=MMUCEDO_000002-T1;Parent=MMUCEDO_000002;product=hypothetical protein;
12 scaffold_1 funannotate exon 4621 4715 . + . ID=MMUCEDO_000002-T1.exon1;Parent=MMUCEDO_000002-T1;
13 scaffold_1 funannotate exon 4812 5100 . + . ID=MMUCEDO_000002-T1.exon2;Parent=MMUCEDO_000002-T1;
14 scaffold_1 funannotate exon 5185 5250 . + . ID=MMUCEDO_000002-T1.exon3;Parent=MMUCEDO_000002-T1;
15 scaffold_1 funannotate exon 5312 5375 . + . ID=MMUCEDO_000002-T1.exon4;Parent=MMUCEDO_000002-T1;
16 scaffold_1 funannotate exon 5457 5488 . + . ID=MMUCEDO_000002-T1.exon5;Parent=MMUCEDO_000002-T1;
17 scaffold_1 funannotate exon 5557 5580 . + . ID=MMUCEDO_000002-T1.exon6;Parent=MMUCEDO_000002-T1;
18 scaffold_1 funannotate CDS 4621 4715 . + 0 ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
19 scaffold_1 funannotate CDS 4812 5100 . + 1 ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
20 scaffold_1 funannotate CDS 5185 5250 . + 0 ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
21 scaffold_1 funannotate CDS 5312 5375 . + 0 ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
22 scaffold_1 funannotate CDS 5457 5488 . + 2 ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
23 scaffold_1 funannotate CDS 5557 5580 . + 0 ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
24 scaffold_1 funannotate gene 6121 6864 . + . ID=MMUCEDO_000003;
25 scaffold_1 funannotate mRNA 6121 6864 . + . ID=MMUCEDO_000003-T1;Parent=MMUCEDO_000003;product=hypothetical protein;
26 scaffold_1 funannotate exon 6121 6146 . + . ID=MMUCEDO_000003-T1.exon1;Parent=MMUCEDO_000003-T1;
27 scaffold_1 funannotate exon 6198 6219 . + . ID=MMUCEDO_000003-T1.exon2;Parent=MMUCEDO_000003-T1;
28 scaffold_1 funannotate exon 6348 6358 . + . ID=MMUCEDO_000003-T1.exon3;Parent=MMUCEDO_000003-T1;
29 scaffold_1 funannotate exon 6447 6864 . + . ID=MMUCEDO_000003-T1.exon4;Parent=MMUCEDO_000003-T1;
30 scaffold_1 funannotate CDS 6121 6146 . + 0 ID=MMUCEDO_000003-T1.cds;Parent=MMUCEDO_000003-T1;
31 scaffold_1 funannotate CDS 6198 6219 . + 1 ID=MMUCEDO_000003-T1.cds;Parent=MMUCEDO_000003-T1;
32 scaffold_1 funannotate CDS 6348 6358 . + 0 ID=MMUCEDO_000003-T1.cds;Parent=MMUCEDO_000003-T1;
33 scaffold_1 funannotate CDS 6447 6864 . + 1 ID=MMUCEDO_000003-T1.cds;Parent=MMUCEDO_000003-T1;
34 scaffold_1 funannotate gene 6889 7683 . + . ID=MMUCEDO_000004;
35 scaffold_1 funannotate mRNA 6889 7683 . + . ID=MMUCEDO_000004-T1;Parent=MMUCEDO_000004;product=hypothetical protein;
36 scaffold_1 funannotate exon 6889 7683 . + . ID=MMUCEDO_000004-T1.exon1;Parent=MMUCEDO_000004-T1;
37 scaffold_1 funannotate CDS 6889 7683 . + 0 ID=MMUCEDO_000004-T1.cds;Parent=MMUCEDO_000004-T1;
38 scaffold_1 funannotate gene 9569 10657 . + . ID=MMUCEDO_000005;
39 scaffold_1 funannotate mRNA 9569 10657 . + . ID=MMUCEDO_000005-T1;Parent=MMUCEDO_000005;product=hypothetical protein;
40 scaffold_1 funannotate exon 9569 9699 . + . ID=MMUCEDO_000005-T1.exon1;Parent=MMUCEDO_000005-T1;
41 scaffold_1 funannotate exon 9763 9850 . + . ID=MMUCEDO_000005-T1.exon2;Parent=MMUCEDO_000005-T1;
42 scaffold_1 funannotate exon 9908 10657 . + . ID=MMUCEDO_000005-T1.exon3;Parent=MMUCEDO_000005-T1;
43 scaffold_1 funannotate CDS 9569 9699 . + 0 ID=MMUCEDO_000005-T1.cds;Parent=MMUCEDO_000005-T1;
44 scaffold_1 funannotate CDS 9763 9850 . + 1 ID=MMUCEDO_000005-T1.cds;Parent=MMUCEDO_000005-T1;
45 scaffold_1 funannotate CDS 9908 10657 . + 0 ID=MMUCEDO_000005-T1.cds;Parent=MMUCEDO_000005-T1;