Mercurial > repos > gga > genenotebook_genenotebook_build

comparison launch_gnb.sh @ 2:5a6050937cb9 draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit ec3c633a0751bb9e253bcd77fea425180c9a0014
author gga
date Fri, 14 Apr 2023 10:13:56 +0000
parents f415e44e71de
children dfb2bc3aedbd
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1:f415e44e71de 2:5a6050937cb9
15 fi; 15 fi;
16 16
17 TMP_STORAGE=$(pwd)/tmp_storage 17 TMP_STORAGE=$(pwd)/tmp_storage
18 mkdir "$TMP_STORAGE" 18 mkdir "$TMP_STORAGE"
19 19
20 export NODE_OPTIONS="--max-old-space-size=$((${GALAXY_MEMORY_MB:-8192} * 75 / 100))"
21
20 genoboo run --storage-path "$TMP_STORAGE" --port ${GNB_PORT} --mongo-url mongodb://$MONGO_URI%2Fmongodb-27017.sock/genenotebook > ./gnb.log 2>&1 & 22 genoboo run --storage-path "$TMP_STORAGE" --port ${GNB_PORT} --mongo-url mongodb://$MONGO_URI%2Fmongodb-27017.sock/genenotebook > ./gnb.log 2>&1 &
21 23
22 export GNB_PID=$! 24 export GNB_PID=$!
23 25
24 sleep 15 26 sleep 15