diff analysis_add_analysis.xml @ 0:f8dab3351d1b draft

planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f745b23c84a615bf434d717c8c0e553a012f0268

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/analysis_add_analysis.xml	Mon Sep 11 05:49:35 2017 -0400
@@ -0,0 +1,56 @@
+<?xml version="1.0"?>
+<tool id="analysis_add_analysis" profile="16.04" name="Create an analysis" version="@WRAPPER_VERSION@.0">
+    <description>in Tripal</description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <expand macro="requirements">
+        <requirement type="package" version="1.5">jq</requirement>
+    </expand>
+    <expand macro="stdio"/>
+    <command><![CDATA[
+
+        @AUTH@
+
+        tripaille analysis add_analysis
+
+            @ANALYSIS@
+
+            | jq -S . > $results
+    ]]></command>
+    <inputs>
+        <expand macro="analysis" />
+    </inputs>
+    <outputs>
+        <data format="json" name="results" label="New Tripal analysis" />
+    </outputs>
+    <tests>
+        <test expect_failure="true">
+            <section name="analysis">
+                <param name="name" value="Some analysis" />
+                <param name="program" value="blastp" />
+                <param name="program_version" value="2.5.0" />
+                <param name="algorithm" value="blast" />
+                <param name="source" value="NCBI" />
+                <param name="source_version" value="1.0" />
+                <param name="source_uri" value="http://ncbi.com/somewhere" />
+                <param name="description" value="My cool new test analysis" />
+                <param name="date" value="2016-12-12" />
+            </section>
+
+            <expand macro="test_result" />
+        </test>
+    </tests>
+    <help><![CDATA[
+        @HELP_OVERVIEW@
+
+        **Create Analysis**
+
+        With this tool, you can create a new analysis in the Tripal/Chado database.
+
+        Keep in mind that you cannot add multiple analysis with the same program, program version and source.
+
+        @HELP@
+    ]]></help>
+    <expand macro="citation"/>
+</tool>