Mercurial > repos > gga > tripal_analysis_load_gff3
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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f55bad7dcf56bd9625874cd89f3894aee35d91ef
| author | gga |
|---|---|
| date | Tue, 19 Sep 2017 12:25:10 -0400 |
| parents | |
| children | 16acaa0aa58c |
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Galaxy-tripal ============= Galaxy tools to interface with Tripal using pyhon-tripal Dependencies ------------ You will need to install some python modules in the Galaxy virtualenv for these tools to be fully functional: .. code:: bash . /path/to/galaxy/.venv/bin/activate pip install future tripal deactivate Environment ----------- The following environment variables must be set: +--------------------------------+-----------------------------------------------------------+ | ENV | Use | +================================+===========================================================+ | ``$GALAXY_TRIPAL_URL`` | The URL at which Tripal is accessible, internal to Galaxy | | | and where the tools run. Must be absolute, with FQDN and | | | protocol. | +--------------------------------+-----------------------------------------------------------+ | ``$GALAXY_TRIPAL_USER`` | The admin user which Galaxy should use to talk to Tripal. | | | | +--------------------------------+-----------------------------------------------------------+ | ``$GALAXY_TRIPAL_PASSWORD`` | The password for the admin user. | | | | | | | +--------------------------------+-----------------------------------------------------------+ | ``$GALAXY_TRIPAL_SHARED_DIR`` | Directory shared between Galaxy and Tripal, used to | | | exchange data files. | +--------------------------------+-----------------------------------------------------------+ License ------- All python scripts, wrappers, and the webapollo.py are licensed under MIT license.