diff db_populate_mviews.xml @ 0:7fff65c442fe draft

planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f745b23c84a615bf434d717c8c0e553a012f0268
author gga
date Mon, 11 Sep 2017 05:53:04 -0400
parents
children 52f0e9417dc1
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/db_populate_mviews.xml	Mon Sep 11 05:53:04 2017 -0400
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+<?xml version="1.0"?>
+<tool id="db_populate_mviews" profile="16.04" name="Populate materialized views" version="@WRAPPER_VERSION@.0">
+    <description>in Tripal</description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <expand macro="requirements"/>
+    <expand macro="stdio"/>
+    <command><![CDATA[
+
+        @AUTH@
+
+        tripaille db populate_mviews
+
+            #if $mview:
+                --name '${mview}'
+            #end if
+
+        &&
+
+        echo "Data loaded" > $results
+    ]]></command>
+    <inputs>
+        <param name="mview"
+               argument="--name"
+               type="text"
+               optional="true"
+               label="View name"
+               help="The materialized view name to populate (leave empty to populate all views)" />
+    </inputs>
+    <outputs>
+        <data format="txt" name="results" label="Populate Tripal materialized view(s)" />
+    </outputs>
+    <tests>
+        <test expect_failure="true" expect_exit_code="1">
+            <expand macro="test_result" />
+        </test>
+        <test expect_failure="true" expect_exit_code="1">
+            <param name="mview" value="Test" />
+
+            <expand macro="test_result" />
+        </test>
+    </tests>
+    <help><![CDATA[
+        @HELP_OVERVIEW@
+
+        **Populate Materialized View**
+
+        With this tool, you can populate a materialized view in a Tripal instance.
+
+        @HELP@
+    ]]></help>
+    <expand macro="citation"/>
+</tool>