Mercurial > repos > gga > tripal_organism_add_organism

changeset 4:2d707e97598b draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit d9f27b297d9a919471c92b02ecf6cc9554457211
author gga
date Tue, 30 Oct 2018 04:37:51 -0400
parents 92407294b12e
children 2972216ff7af
files organism_add_organism.xml
diffstat 1 files changed, 3 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/organism_add_organism.xml	Mon Aug 06 04:44:48 2018 -0400
+++ b/organism_add_organism.xml	Tue Oct 30 04:37:51 2018 -0400
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
-<tool id="organism_add_organism" profile="16.04" name="Create an organism" version="@WRAPPER_VERSION@.0">
+<tool id="organism_add_organism" profile="16.04" name="Create an organism" version="@WRAPPER_VERSION@.1">
     <description>in Tripal</description>
     <macros>
         <import>macros.xml</import>
@@ -23,10 +23,10 @@
                 --infraspecific_name '$infra.name'
             #end if
 
+            --common '$common'
+            --abbr '$abbr'
             '$genus'
             '$species'
-            '$common'
-            '$abbr'
 
             | jq -S . > $results
     ]]></command>
@@ -92,7 +92,6 @@
             <param name="abbr" value="test" />
             <param name="common" value="test stuff" />
             <param name="common" value="My cool new test organism" />
-
             <expand macro="test_result" />
         </test>
         <test expect_failure="true">
@@ -106,7 +105,6 @@
                 <param name="rank" value="subspecies" />
                 <param name="name" value="strain3" />
             </conditional>
-
             <expand macro="test_result" />
         </test>
     </tests>