Mercurial > repos > gga > tripal_organism_add_organism

changeset 3:92407294b12e draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit d21999bb3e142fd972a3338b70216989a257d5b1
author gga
date Mon, 06 Aug 2018 04:44:48 -0400
parents e35aee4aa5df
children 2d707e97598b
files macros.xml organism_add_organism.xml
diffstat 2 files changed, 3 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Thu Jun 21 08:49:02 2018 -0400
+++ b/macros.xml	Mon Aug 06 04:44:48 2018 -0400
@@ -2,7 +2,7 @@
 <macros>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="2.0.4">python-tripal</requirement>
+            <requirement type="package" version="3.0">python-tripal</requirement>
             <yield/>
         </requirements>
     </xml>
@@ -15,7 +15,7 @@
         </stdio>
     </xml>
 
-    <token name="@WRAPPER_VERSION@">2.0.4</token>
+    <token name="@WRAPPER_VERSION@">3.0</token>
 
     <xml name="citation">
         <citations>
--- a/organism_add_organism.xml	Thu Jun 21 08:49:02 2018 -0400
+++ b/organism_add_organism.xml	Mon Aug 06 04:44:48 2018 -0400
@@ -14,10 +14,6 @@
 
         tripaille organism add_organism
 
-            #if str($species):
-                --species '$species'
-            #end if
-
             #if str($description):
                 --comment '$description'
             #end if
@@ -28,6 +24,7 @@
             #end if
 
             '$genus'
+            '$species'
             '$common'
             '$abbr'
 
@@ -43,7 +40,6 @@
                argument="--species"
                type="text"
                label="Species"
-               optional="True"
                help="e.g.: sapiens" />
 
         <param name="abbr"