2
|
1 LOCUS Exported 6850 bp ds-DNA circular SYN 13-NOV-2018
|
|
2 DEFINITION synthetic circular DNA
|
|
3 ACCESSION .
|
|
4 VERSION .
|
|
5 KEYWORDS .
|
|
6 SOURCE synthetic DNA construct
|
|
7 ORGANISM synthetic DNA construct
|
|
8 REFERENCE 1 (bases 1 to 6850)
|
|
9 AUTHORS .
|
|
10 TITLE Direct Submission
|
|
11 JOURNAL Exported Nov 13, 2018 from SnapGene 4.2.6
|
|
12 http://www.snapgene.com
|
|
13 COMMENT LOCUS dna 6850 bp
|
|
14 FEATURES Location/Qualifiers
|
|
15 source 1..6850
|
|
16 /organism="synthetic DNA construct"
|
|
17 /mol_type="other DNA"
|
|
18 misc_feature 1..819
|
|
19 /label=p15A origin of replication region
|
|
20 /note="p15A origin of replication region"
|
|
21 misc_feature 1032..3625
|
|
22 /label=Staphylococcus aureus plasmid pC194
|
|
23 /note="Staphylococcus aureus plasmid pC194 region
|
|
24 (NC_002013.1)"
|
|
25 misc_feature 1126..1324
|
|
26 /label=Repeat sequence 1 of 2
|
|
27 /note="Repeat sequence 1 of 2"
|
|
28 CDS complement(1562..2212)
|
|
29 /label=Chloramphenicol Resistance
|
|
30 CDS complement(2346..2744)
|
|
31 /label=Potential Copy number associated protein
|
|
32 /note="Potential Copy number associated protein"
|
|
33 misc_feature 2463..2517
|
|
34 /label=pC194 replication origin
|
|
35 /note="pC194 replication origin (detailed in PMC401278)"
|
|
36 misc_feature 2670..3605
|
|
37 /label=Replication initiation protein Rep RC
|
|
38 misc_feature 3626..3824
|
|
39 /label=Repeat sequence 2 of 2
|
|
40 /note="Repeat sequence 2 of 2"
|
|
41 misc_feature 3825..5278
|
|
42 /label=Xylose Inducible Promoter Region
|
|
43 /note="Xylose Inducible Promoter Region, Xyl promoter, Xyl
|
|
44 repressor protein, Xyl terminator sequence and pTX5
|
|
45 promoter facing MCS:
|
|
46 http://parts.igem.org/Part:BBa_K1323014"
|
|
47 CDS 4000..5151
|
|
48 /label=XylR repressor protein
|
|
49 misc_feature 5191..5241
|
|
50 /label=Bacteriophage T5 PN25 promoter
|
|
51 /note="Bacteriophage T5 PN25 promoter (Deuschle et al,
|
|
52 PMC1167251)"
|
|
53 misc_feature 5206..5211
|
|
54 /label=-30 region
|
|
55 /note="-30 region"
|
|
56 misc_feature 5229..5234
|
|
57 /label=-10 region
|
|
58 /note="-10 region"
|
|
59 misc_feature 5241..5279
|
|
60 /label=Xyl operator containing palindromic
|
|
61 /note="interfering with transcription initiation"
|
|
62 misc_feature 5279..5317
|
|
63 /label=MCS
|
|
64 /note="MCS"
|
|
65 terminator 5393..5550
|
|
66 /label=rrnB term
|
|
67 terminator 5516..5559
|
|
68 /label=rrnB_T1 term
|
|
69 terminator 5691..5718
|
|
70 /label=rrnB_T2 term
|
|
71 misc_feature complement(5860..6720)
|
|
72 /label=Ampicillin Resistance
|
|
73 /note="gene of the plasmid pLEX5BA"
|
|
74 promoter complement(6762..6790)
|
|
75 /label=amp prom
|
|
76 ORIGIN
|
|
77 1 ggcggccgca ctggcttact atgttggcac tgatgagggt gtcagtgaag tgcttcatgt
|
|
78 61 ggcaggagaa aaaaggctgc accggtgcgt cagcagaata tgtgatacag gatatattcc
|
|
79 121 gcttcctcgc tcactgactc gctacgctcg gtcgttcgac tgcggcgagc ggaaatggct
|
|
80 181 tacgaacggg gcggagattt cctggaagat gccaggaaga tacttaacag ggaagtgaga
|
|
81 241 gggccgcggc aaagccgttt ttccataggc tccgcccccc tgacaagcat cacgaaatct
|
|
82 301 gacgctcaaa tcagtggtgg cgaaacccga caggactata aagataccag gcgtttcccc
|
|
83 361 ctggcggctc cctcgtgcgc tctcctgttc ctgcctttcg gtttaccggt gtcattccgc
|
|
84 421 tgttatggcc gcgtttgtct cattccacgc ctgacactca gttccgggta ggcagttcgc
|
|
85 481 tccaagctgg actgtatgca cgaacccccc gttcagtccg accgctgcgc cttatccggt
|
|
86 541 aactatcgtc ttgagtccaa cccggaaaga catgcaaaag caccactggc agcagccact
|
|
87 601 ggtaattgat ttagaggagt tagtcttgaa gtcatgcgcc ggttaaggct aaactgaaag
|
|
88 661 gacaagtttt ggtgactgcg ctcctccaag ccagttacct cggttcaaag agttggtagc
|
|
89 721 tcagagaacc ttcgaaaaac cgccctgcaa ggcggttttt tcgttttcag agcaagagat
|
|
90 781 tacgcgcaga ccaaaacgat ctcaagaaga tcatcttatg cggccgcttc tttcctgcgt
|
|
91 841 tatcccctga ttctgtggat aaccgtatta ccgcctttga gtgagctgat accgctcgcc
|
|
92 901 gcagccgaac gaccgagcgc agcgagtcag tgagcgagga agcggaagag cgcctgatgc
|
|
93 961 ggtattttct ccttacgcat ctgtgcggta tttcacaccg cataggaaga tccctcgacc
|
|
94 1021 tgcaggcatg caagcttctg taggttttta ggcataaaac tatatgattt acccctaaat
|
|
95 1081 ctttaaaatg ccccttaaaa ttcaaaataa aggcatttaa aatttaaata tttcttgtga
|
|
96 1141 taaagtttgt taaaaaggag tggttttatg actgttatgt ggttatcgat tataggtatg
|
|
97 1201 tggttttgta ttggaatggc attttttgct atcaaggtta ttaaaaataa aaattagacc
|
|
98 1261 acgcatttat gccgagaaaa tttattgtgc gttgagaaga acccttaact aaacttgcag
|
|
99 1321 acgaatgtcg gcatagcgtg agctattaag ccgaccattc gacaagtttt gggattgtta
|
|
100 1381 agggttccga ggctcaacgt caataaagca attggaataa agaagcgaaa aaggagaagt
|
|
101 1441 cggttcagaa aaagaaggat atggatctgg agctgtaata taaaaacctt cttcaactaa
|
|
102 1501 cggggcaggt tagtgacatt agaaaaccga ctgtaaaaag tacagtcggc attatctcat
|
|
103 1561 attataaaag ccagtcatta ggcctatctg acaattcctg aatagagttc ataaacaatc
|
|
104 1621 ctgcatgata accatcacaa acagaatgat gtacctgtaa agatagcggt aaatatattg
|
|
105 1681 aattaccttt attaatgaat tttcctgctg taataatggg tagaaggtaa ttactattat
|
|
106 1741 tattgatatt taagttaaac ccagtaaatg aagtccatgg aataatagaa agagaaaaag
|
|
107 1801 cattttcagg tataggtgtt ttgggaaaca atttccccga accattatat ttctctacat
|
|
108 1861 cagaaaggta taaatcataa aactctttga agtcattctt tacaggagtc caaataccag
|
|
109 1921 agaatgtttt agatacacca tcaaaaattg tataaagtgg ctctaactta tcccaataac
|
|
110 1981 ctaactctcc gtcgctattg taaccagttc taaaagctgt atttgagttt atcacccttg
|
|
111 2041 tcactaagaa aataaatgca gggtaaaatt tatatccttc ttgttttatg tttcggtata
|
|
112 2101 aaacactaat atcaatttct gtggttatac taaaagtcgt ttgttggttc aaataatgat
|
|
113 2161 taaatatctc ttttctcttc caattgtcta aatcaatttt attaaagttc atttgatatg
|
|
114 2221 cctcctaaat ttttatctaa agtgaattta ggaggcttac ttgtctgctt tcttcattag
|
|
115 2281 aatcaatcct tttttaaaag tcaatattac tgtaacataa atatatattt taaaaatatc
|
|
116 2341 ccactttatc caattttcgt ttgttgaact aatgggtgct ttagttgaag aataaaagac
|
|
117 2401 cacattaaaa aatgtggtct tttgtgtttt tttaaaggat ttgagcgtag cgaaaaatcc
|
|
118 2461 ttttctttct tatcttgata ataagggtaa ctattgccgg cgaggctagt tacccttaag
|
|
119 2521 ttattggtat gactggtttt aagcgcaaaa aaagttgctt tttcgtacct attaatgtat
|
|
120 2581 cgttttaaat gaatagtaaa aaacatacat agaaagggga aaaagcaact ttttttattg
|
|
121 2641 tcatagtttg tgaaaactaa gttgttttta tgtgttataa catggaaaag tatactgaga
|
|
122 2701 aaaaacaaag aaatcaagta tttcagaaat ttattaaacg tcatattgga gagaatcaaa
|
|
123 2761 tggatttagt tgaagattgc aatacatttc tgtcttttgt agctgataaa actttagaaa
|
|
124 2821 aacagaaatt atataaagct aattcttgta aaaatcgatt ttgtcctgtc tgtgcttgga
|
|
125 2881 gaaaagctag aaaagatgca ttgggtttat ctttgatgat gcaatatatt aagcagcaag
|
|
126 2941 agaaaaagga gtttatcttt ttaactttga ctacacctaa tgtaatgagt gatgaattag
|
|
127 3001 aaaatgaaat aaaacgttat aataattctt ttagaaaact tataaagaga aaaaaagtag
|
|
128 3061 gtagtgttat aaagggatat gttcgtaagt tagagattac atataataaa aaaagagatg
|
|
129 3121 attataatcc tcattttcat gtgttaattg cagtaaataa atcgtatttc acagataaaa
|
|
130 3181 gatattatat tagccaacaa gaatggttag atttatggcg tgatgtaacg ggcatttcag
|
|
131 3241 aaataacaca agttcaagtt caaaaaataa gacaaaataa taataaagaa ttatatgaaa
|
|
132 3301 tggctaagta ttctggtaaa gatagtgatt atttaataaa tcaaaaagtc tttgatgcat
|
|
133 3361 tttataaatc acttaaaggt aaacaggtat tagtttattc aggattattt aaagaggcta
|
|
134 3421 aaaagaaatt aaaaaatggg gatttagatt acttaaaaga aattgatcca accgaatata
|
|
135 3481 tctatcaaat tttttatatt tggaaacaaa aagagtattt agctagtgaa ctttatgact
|
|
136 3541 taacagaaca agaaaaaaga gaaattaatc acaaaatgat agacgaaatc gaggaagaac
|
|
137 3601 aataacaaaa tataagtgct aacagtcgtc tgcaagttta gttaagggtt cttctcaacg
|
|
138 3661 cacaataaat tttctcggca taaatgcgtg gtctaatttt tatttttaat aaccttgata
|
|
139 3721 gcaaaaaatg ccattccaat acaaaaccac atacctataa tcgataacca cataacagtc
|
|
140 3781 ataaaaccac tcctttttaa caaactttat cacaagaaat attttggcat tctacgacta
|
|
141 3841 taacttaaat ttatattttt tactttataa tatataattg attatagaat aatgttgctc
|
|
142 3901 atatcgtttg ccaacatcta gtactcaaat tacactatgt tacacttggt aatattaacc
|
|
143 3961 gaacttcccc tgtccaaatt agataagagg taataataaa tggaaaataa ttttatagta
|
|
144 4021 aatgaaaatg agaagcgtgt attaaaacaa attttcaata acagcaatat ttcacgaaca
|
|
145 4081 caaatatcga agaatttaga acttaataaa gctactattt ctaacattct gaacaactta
|
|
146 4141 aaacacaaga gtttagttaa tgaagtagga gaaggtaata gtactaaaag tggtggacga
|
|
147 4201 aagcctattt tactcgaaat taaccaaaaa tatggctact atatttctat ggatttaaca
|
|
148 4261 tatgattccg ttgaattaat gtacaactac tttgatgcta ctatattaaa gcaagattcc
|
|
149 4321 tacgaattaa atgataaaaa tgtaagcagt atattacaaa ttttaaaatc taatataaac
|
|
150 4381 gtctcagaaa aatatgatac gttatatggg ttacttggta tatctatatc catacacggt
|
|
151 4441 atcgttgacg atgagcaaaa cataatcaat cttccttttc ataaaaatga gaaacgcaca
|
|
152 4501 tttaccgatg aattaaagtc attcacaaat gttcctgtcg ttatagaaaa tgaagcaaat
|
|
153 4561 ttatcagcgc tatatgaaaa aagtttatat attaattcaa acataaataa tttgattact
|
|
154 4621 ttaagtattc acaagggtat aggcgctggc atcctaataa ataaaaaact ttatcgtggc
|
|
155 4681 tcaaatggag aggctggaga gataggtaag acattggttt tggaatctat aaataacaat
|
|
156 4741 gacaacaaat attataaaat cgaagatata tgctcccaag acgctttaat acagaaaata
|
|
157 4801 aataataggt tgggcgtcac attgacgttt acagaactaa tccaatatta caacgaagga
|
|
158 4861 aattcaattg ttgctcatga aattaaacaa tttattaata aaatgacagt tctgattcat
|
|
159 4921 aatttgaata cacaatttaa cccagacgct atttatatta actgtccttt aattaatgaa
|
|
160 4981 ttaccaaata ttttaaatga aattaaagag caattctcct gtttttctca aggcagtcca
|
|
161 5041 gttcaattac atttaactac taatgtaaaa caagctactt tattgggtgg cactttagca
|
|
162 5101 ataatgcaaa aaacattaaa tataaataac attcaaatga atattaaata attacagcag
|
|
163 5161 tctgagttat aaaatagata tctcggaccg tcataaaaaa tttatttgct ttcaggaaaa
|
|
164 5221 tttttctgta taatagattc aagttagttt gtttattaaa ttaaccaact aaaatgtaga
|
|
165 5281 attcgagctc ggtacccggg gatcctctag agtcgacctg cagccaagct tgggcttttc
|
|
166 5341 agcctgatac agattaaatc agaacgcaga agcggtctga taaaacagaa tttgcctggc
|
|
167 5401 ggcagtagcg cggtggtccc acctgacccc atgccgaact cagaagtgaa acgccgtagc
|
|
168 5461 gccgatggta gtgtggggtc tccccatgcg agagtaggga actgccaggc atcaaataaa
|
|
169 5521 acgaaaggct cagtcgaaag actgggcctt tcgttttatc tgttgtttgt cggtgaacgc
|
|
170 5581 tctcctgagt aggacaaatc cgccgggagc ggatttgaac gttgcgaagc aacggcccgg
|
|
171 5641 agggtggcgg gcaggacgcc cgccataaac tgccaggcat caaattaagc agaaggccat
|
|
172 5701 cctgacggat ggcctttttg cgtttctaca aactcttttg tttatttttc taaatacatt
|
|
173 5761 caaatatgta tccgctcatc cccatcctat cgatgataag ctgtcaaaca tgagaattaa
|
|
174 5821 atcaatctaa agtatatatg agtaaacttg gtctgacagt taccaatgct taatcagtga
|
|
175 5881 ggcacctatc tcagcgatct gtctatttcg ttcatccata gttgcctgac tccccgtcgt
|
|
176 5941 gtagataact acgatacggg agggcttacc atctggcccc agtgctgcaa tgataccgcg
|
|
177 6001 agacccacgc tcaccggctc cagatttatc agcaataaac cagccagccg gaagggccga
|
|
178 6061 gcgcagaagt ggtcctgcaa ctttatccgc ctccatccag tctattaatt gttgccggga
|
|
179 6121 agctagagta agtagttcgc cagttaatag tttgcgcaac gttgttgcca ttgctacagg
|
|
180 6181 catcgtggtg tcacgctcgt cgtttggtat ggcttcattc agctccggtt cccaacgatc
|
|
181 6241 aaggcgagtt acatgatccc ccatgttgtg caaaaaagcg gttagctcct tcggtcctcc
|
|
182 6301 gatcgttgtc agaagtaagt tggccgcagt gttatcactc atggttatgg cagcactgca
|
|
183 6361 taattctctt actgtcatgc catccgtaag atgcttttct gtgactggtg agtactcaac
|
|
184 6421 caagtcattc tgagaatagt gtatgcggcg accgagttgc tcttgcccgg cgtcaacacg
|
|
185 6481 ggataatacc gcgccacata gcagaacttt aaaagtgctc atcattggaa aacgctcttc
|
|
186 6541 ggggcgaaaa ctctcaagga tcttaccgct gttgagatcc agttcgatgt aacccactcg
|
|
187 6601 tgcacccaac tgatcttcag catcttttac tttcaccagc gtttctgggt gagcaaaaac
|
|
188 6661 aggaaggcaa aatgccgcaa aaaagggaat aagggcgaca cggaaatgtt gaatactcat
|
|
189 6721 actcttcctt tttcaatatt attgaagcat ttatcagggt tattgtctca tgagcggata
|
|
190 6781 catatttgaa tgtatttaga aaaataaaca aataggggtt ccgcgcacat ttccccgaaa
|
|
191 6841 agtgccacct
|
|
192 //
|