Mercurial > repos > gianmarco_piccinno > project_rm
comparison codon_usage.xml @ 19:c51d2aa42d7d draft
Uploaded
| author | gianmarco_piccinno |
|---|---|
| date | Tue, 11 Dec 2018 11:47:38 -0500 |
| parents | cb21772b534a |
| children | 21b35ba256d9 |
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| 18:cf6d9aedee8f | 19:c51d2aa42d7d |
|---|---|
| 4 <requirement type=“package” version=“3.6.0”>python</requirement> | 4 <requirement type=“package” version=“3.6.0”>python</requirement> |
| 5 <requirement type=“package” version=“1.72”>biopython</requirement> | 5 <requirement type=“package” version=“1.72”>biopython</requirement> |
| 6 <requirement type=“package” version=“0.23.4”>pandas</requirement> | 6 <requirement type=“package” version=“0.23.4”>pandas</requirement> |
| 7 </requirements> | 7 </requirements> |
| 8 | 8 |
| 9 <command>codon_usage.py -i $input -t $input_type -o $output -c $codon_table</command> | 9 <command>python $__tool_directory__/codon_usage.py -i $input -t $input_type -o $output -c $codon_table</command> |
| 10 <inputs> | 10 <inputs> |
| 11 <param name="input" format="fasta" type="data" label="Source file"/> | 11 <param name="input" format="fasta" type="data" label="Source file"/> |
| 12 | 12 |
| 13 <param name="input_type" type="select" format="text"> | 13 <param name="input_type" type="select" format="text"> |
| 14 <label>Indicate the input file format</label> | 14 <label>Indicate the input file format</label> |