# HG changeset patch # User gkumar09 # Date 1443036199 14400 # Node ID adf57ab6155e847ef715a89c6245fea0770dd0fa # Parent 32b2ed082d0c089ca30c96f5437d93062fd20a05 Uploaded diff -r 32b2ed082d0c -r adf57ab6155e diffExpress_edgeR.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/diffExpress_edgeR.xml Wed Sep 23 15:23:19 2015 -0400 @@ -0,0 +1,47 @@ + + + Identify Differentially Expressed Transcripts Using EdgeR + + edgeR + + + + trinityToolWrapper.py Analysis/DifferentialExpression/run_EdgeR.pl + --matrix $counts_matrix + --transcripts $transcripts_fasta_file + --output edgeR_results + --dispersion $dispersion + + > stdout.txt + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + help info here. + +