comparison mirbase_functions.py @ 33:77ba8dde6fb7 draft

Uploaded

32:5d232330e81f

    # Correction of metrics due to the collapsing and removing of duplicates for the production of Database
    for y in sorted_uni_arms:
       counts=0
       seqs=0
       for x in collapsed_mirnas:
           if y[0]==x[2].split("_")[0]:
              counts+=int(x[0].split("-")[1])
              seqs+=1

       y[1]=seqs
       y[2]=counts

33:77ba8dde6fb7

    # Correction of metrics due to the collapsing and removing of duplicates for the production of Database
    for y in sorted_uni_arms:
       counts=0
       seqs=0
       for x in collapsed_mirnas:
           if y[0] in x[2].split("_")[0]:
              counts+=int(x[0].split("-")[1])
              seqs+=1

       y[1]=seqs
       y[2]=counts