Mercurial > repos > goeckslab > celesta
comparison celesta.xml @ 3:283636dbfba5 draft default tip
planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/celesta commit 36453551b1045adf20925d4eb6b5816c64475728
| author | goeckslab |
|---|---|
| date | Thu, 19 Sep 2024 17:17:51 +0000 |
| parents | 41aaffbb9473 |
| children |
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| 2:41aaffbb9473 | 3:283636dbfba5 |
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| 41 #if $runmode.options.high_thresholds_file: | 41 #if $runmode.options.high_thresholds_file: |
| 42 --highexpthresh '${runmode.options.high_thresholds_file}' | 42 --highexpthresh '${runmode.options.high_thresholds_file}' |
| 43 #end if | 43 #end if |
| 44 #for $p in $runmode.plot_cells: | 44 #for $p in $runmode.plot_cells: |
| 45 && Rscript '$__tool_directory__/celesta_plot_cells.R' | 45 && Rscript '$__tool_directory__/celesta_plot_cells.R' |
| 46 --prior '$prior_info' | |
| 47 --celltypes '${p.cell_types}' | 46 --celltypes '${p.cell_types}' |
| 48 --size '${p.test_size}' | 47 --size '${p.test_size}' |
| 49 --height '${p.height}' | 48 --height '${p.height}' |
| 50 --width '${p.width}' | 49 --width '${p.width}' |
| 51 --dpi '${p.dpi}' | 50 --dpi '${p.dpi}' |