Mercurial > repos > goeckslab > image_learner

annotate utils.py @ 8:85e6f4b2ad18 draft default tip

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planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
author goeckslab
date Thu, 14 Aug 2025 14:53:10 +0000
parents 186424a7eca7
children
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54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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1 import base64
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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2 import json
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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3
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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4
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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5 def get_html_template():
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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6 return """
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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7 <html>
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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8 <head>
1
39202fe5cf97 planemo upload for repository https://github.com/goeckslab/gleam.git commit 06c0da44ac93256dfb616a6b40276b5485a71e8e
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9 <meta charset="UTF-8">
0
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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10 <title>Galaxy-Ludwig Report</title>
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85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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11
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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12 <!-- your existing styles -->
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54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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13 <style>
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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14 body {
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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15 font-family: Arial, sans-serif;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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16 margin: 0;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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17 padding: 20px;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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18 background-color: #f4f4f4;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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19 }
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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20 .container {
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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21 max-width: 800px;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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22 margin: auto;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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23 background: white;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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24 padding: 20px;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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25 box-shadow: 0 0 10px rgba(0, 0, 0, 0.1);
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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26 overflow-x: auto;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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27 }
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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28 h1 {
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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29 text-align: center;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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30 color: #333;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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31 }
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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32 h2 {
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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33 border-bottom: 2px solid #4CAF50;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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34 color: #4CAF50;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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35 padding-bottom: 5px;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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36 }
8
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37 /* baseline table setup */
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54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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38 table {
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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39 border-collapse: collapse;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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40 margin: 20px 0;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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41 width: 100%;
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42 table-layout: fixed;
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54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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43 }
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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44 table, th, td {
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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45 border: 1px solid #ddd;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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46 }
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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47 th, td {
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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48 padding: 8px;
8
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49 text-align: center;
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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50 vertical-align: middle;
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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51 word-wrap: break-word;
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52 }
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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53 th {
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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54 background-color: #4CAF50;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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55 color: white;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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56 }
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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57 .plot {
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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58 text-align: center;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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59 margin: 20px 0;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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60 }
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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61 .plot img {
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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62 max-width: 100%;
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63 height: auto;
54b871dfc51e planemo upload for repository https://github.com/goeckslab/gleam.git commit b7411ff35b6228ccdfd36cd4ebd946c03ac7f7e9
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64 }
8
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65
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66 /* -------------------
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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67 SORTABLE COLUMNS
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68 ------------------- */
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69 table.performance-summary th.sortable {
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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70 cursor: pointer;
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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71 position: relative;
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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72 user-select: none;
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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73 }
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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74 /* hide arrows by default */
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75 table.performance-summary th.sortable::after {
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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76 content: '';
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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77 position: absolute;
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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78 right: 12px;
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79 top: 50%;
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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80 transform: translateY(-50%);
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81 font-size: 0.8em;
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82 color: #666;
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83 }
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84 /* three states */
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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85 table.performance-summary th.sortable.sorted-none::after {
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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86 content: '⇅';
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87 }
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88 table.performance-summary th.sortable.sorted-asc::after {
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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89 content: '↑';
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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90 }
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91 table.performance-summary th.sortable.sorted-desc::after {
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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92 content: '↓';
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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93 }
0
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94 </style>
8
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95
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96 <!-- sorting script -->
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97 <script>
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98 document.addEventListener('DOMContentLoaded', () => {
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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99 // 1) record each row's original position
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100 document.querySelectorAll('table.performance-summary tbody').forEach(tbody => {
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101 Array.from(tbody.rows).forEach((row, i) => {
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102 row.dataset.originalOrder = i;
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103 });
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104 });
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105
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106 const getText = cell => cell.innerText.trim();
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107 const comparer = (idx, asc) => (a, b) => {
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108 const v1 = getText(a.children[idx]);
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109 const v2 = getText(b.children[idx]);
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110 const n1 = parseFloat(v1), n2 = parseFloat(v2);
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111 if (!isNaN(n1) && !isNaN(n2)) {
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112 return asc ? n1 - n2 : n2 - n1;
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113 }
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114 return asc
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115 ? v1.localeCompare(v2)
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116 : v2.localeCompare(v1);
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117 };
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118
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119 document
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120 .querySelectorAll('table.performance-summary th.sortable')
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121 .forEach(th => {
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122 // initialize to "none" state
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123 th.classList.add('sorted-none');
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124 th.addEventListener('click', () => {
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125 const table = th.closest('table');
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126 const allTh = table.querySelectorAll('th.sortable');
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127
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128 // 1) determine current state BEFORE clearing classes
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129 let curr = th.classList.contains('sorted-asc')
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130 ? 'asc'
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131 : th.classList.contains('sorted-desc')
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132 ? 'desc'
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133 : 'none';
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134 // 2) cycle to next state
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135 let next = curr === 'none'
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136 ? 'asc'
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137 : curr === 'asc'
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138 ? 'desc'
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139 : 'none';
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140
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141 // 3) clear all sort markers
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142 allTh.forEach(h =>
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143 h.classList.remove('sorted-none','sorted-asc','sorted-desc')
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144 );
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145 // 4) apply the new marker
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146 th.classList.add(`sorted-${next}`);
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147
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148 // 5) sort or restore original order
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149 const tbody = table.querySelector('tbody');
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150 let rows = Array.from(tbody.rows);
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151 if (next === 'none') {
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152 rows.sort((a, b) =>
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153 a.dataset.originalOrder - b.dataset.originalOrder
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154 );
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155 } else {
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156 const idx = Array.from(th.parentNode.children).indexOf(th);
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157 rows.sort(comparer(idx, next === 'asc'));
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158 }
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159 rows.forEach(r => tbody.appendChild(r));
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160 });
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161 });
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162 });
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163 </script>
0
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164 </head>
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165 <body>
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166 <div class="container">
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167 """
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168
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169
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170 def get_html_closing():
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171 return """
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172 </div>
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173 </body>
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174 </html>
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175 """
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176
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177
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178 def encode_image_to_base64(image_path):
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179 """Convert an image file to a base64 encoded string."""
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180 with open(image_path, "rb") as img_file:
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181 return base64.b64encode(img_file.read()).decode("utf-8")
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182
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183
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184 def json_to_nested_html_table(json_data, depth=0):
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185 """
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186 Convert JSON object to an HTML nested table.
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187
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188 Parameters:
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189 json_data (dict or list): The JSON data to convert.
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190 depth (int): Current depth level for indentation.
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191
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192 Returns:
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193 str: HTML string for the nested table.
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194 """
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195 # Base case: if JSON is a simple key-value pair dictionary
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196 if isinstance(json_data, dict) and all(
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197 not isinstance(v, (dict, list)) for v in json_data.values()
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198 ):
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199 # Render a flat table
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200 rows = [
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201 f"<tr><th>{key}</th><td>{value}</td></tr>"
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202 for key, value in json_data.items()
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203 ]
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204 return f"<table>{''.join(rows)}</table>"
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205
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206 # Base case: if JSON is a list of simple values
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207 if isinstance(json_data, list) and all(
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208 not isinstance(v, (dict, list)) for v in json_data
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209 ):
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210 rows = [
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211 f"<tr><th>Index {i}</th><td>{value}</td></tr>"
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212 for i, value in enumerate(json_data)
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213 ]
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214 return f"<table>{''.join(rows)}</table>"
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215
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216 # Recursive case: if JSON contains nested structures
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217 if isinstance(json_data, dict):
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218 rows = [
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219 f"<tr><th style='padding-left:{depth * 20}px;'>{key}</th>"
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220 f"<td>{json_to_nested_html_table(value, depth + 1)}</td></tr>"
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221 for key, value in json_data.items()
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222 ]
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223 return f"<table>{''.join(rows)}</table>"
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224
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225 if isinstance(json_data, list):
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226 rows = [
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227 f"<tr><th style='padding-left:{depth * 20}px;'>[{i}]</th>"
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228 f"<td>{json_to_nested_html_table(value, depth + 1)}</td></tr>"
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229 for i, value in enumerate(json_data)
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230 ]
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231 return f"<table>{''.join(rows)}</table>"
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232
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233 # Base case: simple value
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234 return f"{json_data}"
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235
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236
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237 def json_to_html_table(json_data):
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238 """
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239 Convert JSON to a vertically oriented HTML table.
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240
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241 Parameters:
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242 json_data (str or dict): JSON string or dictionary.
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243
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244 Returns:
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245 str: HTML table representation.
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246 """
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247 if isinstance(json_data, str):
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248 json_data = json.loads(json_data)
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249 return json_to_nested_html_table(json_data)
2
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250
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251
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252 def build_tabbed_html(metrics_html: str, train_val_html: str, test_html: str) -> str:
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253 return f"""
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254 <style>
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255 .tabs {{
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256 display: flex;
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257 align-items: center;
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258 border-bottom: 2px solid #ccc;
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259 margin-bottom: 1rem;
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260 }}
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261 .tab {{
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262 padding: 10px 20px;
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263 cursor: pointer;
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264 border: 1px solid #ccc;
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265 border-bottom: none;
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266 background: #f9f9f9;
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267 margin-right: 5px;
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268 border-top-left-radius: 8px;
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269 border-top-right-radius: 8px;
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270 }}
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271 .tab.active {{
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272 background: white;
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273 font-weight: bold;
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274 }}
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275 /* new help-button styling */
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276 .help-btn {{
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277 margin-left: auto;
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278 padding: 6px 12px;
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279 font-size: 0.9rem;
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280 border: 1px solid #4CAF50;
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281 border-radius: 4px;
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282 background: #4CAF50;
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283 color: white;
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284 cursor: pointer;
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285 }}
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286 .tab-content {{
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287 display: none;
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288 padding: 20px;
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289 border: 1px solid #ccc;
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290 border-top: none;
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291 }}
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292 .tab-content.active {{
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293 display: block;
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294 }}
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295 </style>
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296
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297 <div class="tabs">
8
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298 <div class="tab active" onclick="showTab('metrics')">Config and Results Summary</div>
2
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299 <div class="tab" onclick="showTab('trainval')">Train/Validation Results</div>
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300 <div class="tab" onclick="showTab('test')">Test Results</div>
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301 <!-- always-visible help button -->
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302 <button id="openMetricsHelp" class="help-btn">Help</button>
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303 </div>
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304
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305 <div id="metrics" class="tab-content active">
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306 {metrics_html}
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307 </div>
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308 <div id="trainval" class="tab-content">
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309 {train_val_html}
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310 </div>
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311 <div id="test" class="tab-content">
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312 {test_html}
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313 </div>
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314
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315 <script>
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316 function showTab(id) {{
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317 document.querySelectorAll('.tab-content').forEach(el => el.classList.remove('active'));
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318 document.querySelectorAll('.tab').forEach(el => el.classList.remove('active'));
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319 document.getElementById(id).classList.add('active');
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320 document.querySelector(`.tab[onclick*="${{id}}"]`).classList.add('active');
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321 }}
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322 </script>
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323 """
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324
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325
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326 def get_metrics_help_modal() -> str:
8
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327 modal_html = (
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328 '<div id="metricsHelpModal" class="modal">'
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329 ' <div class="modal-content">'
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330 ' <span class="close">×</span>'
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331 ' <h2>Model Evaluation Metrics — Help Guide</h2>'
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332 ' <div class="metrics-guide">'
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333 ' <h3>1) General Metrics (Regression and Classification)</h3>'
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334 ' <p><strong>Loss (Regression & Classification):</strong> '
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335 'Measures the difference between predicted and actual values, '
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336 'optimized during training. Lower is better. '
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337 'For regression, this is often Mean Squared Error (MSE) or '
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338 'Mean Absolute Error (MAE). For classification, it’s typically '
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339 'cross-entropy or log loss.</p>'
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340 ' <h3>2) Regression Metrics</h3>'
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341 ' <p><strong>Mean Absolute Error (MAE):</strong> '
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342 'Average of absolute differences between predicted and actual values, '
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343 'in the same units as the target. Use for interpretable error measurement '
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344 'when all errors are equally important. Less sensitive to outliers than MSE.</p>'
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345 ' <p><strong>Mean Squared Error (MSE):</strong> '
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346 'Average of squared differences between predicted and actual values. '
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347 'Penalizes larger errors more heavily, useful when large deviations are critical. '
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348 'Often used as the loss function in regression.</p>'
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349 ' <p><strong>Root Mean Squared Error (RMSE):</strong> '
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350 'Square root of MSE, in the same units as the target. '
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351 'Balances interpretability and sensitivity to large errors. '
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352 'Widely used for regression evaluation.</p>'
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353 ' <p><strong>Mean Absolute Percentage Error (MAPE):</strong> '
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354 'Average absolute error as a percentage of actual values. '
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355 'Scale-independent, ideal for comparing relative errors across datasets. '
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356 'Avoid when actual values are near zero.</p>'
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357 ' <p><strong>Root Mean Squared Percentage Error (RMSPE):</strong> '
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358 'Square root of mean squared percentage error. Scale-independent, '
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359 'penalizes larger relative errors more than MAPE. Use for forecasting '
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360 'or when relative accuracy matters.</p>'
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361 ' <p><strong>R² Score:</strong> Proportion of variance in the target '
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362 'explained by the model. Ranges from negative infinity to 1 (perfect prediction). '
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363 'Use to assess model fit; negative values indicate poor performance '
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364 'compared to predicting the mean.</p>'
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365 ' <h3>3) Classification Metrics</h3>'
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366 ' <p><strong>Accuracy:</strong> Proportion of correct predictions '
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367 'among all predictions. Simple but misleading for imbalanced datasets, '
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368 'where high accuracy may hide poor performance on minority classes.</p>'
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369 ' <p><strong>Micro Accuracy:</strong> Sums true positives and true negatives '
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370 'across all classes before computing accuracy. Suitable for multiclass or '
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371 'multilabel problems with imbalanced data.</p>'
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372 ' <p><strong>Token Accuracy:</strong> Measures how often predicted tokens '
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373 '(e.g., in sequences) match true tokens. Common in NLP tasks like text generation '
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374 'or token classification.</p>'
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375 ' <p><strong>Precision:</strong> Proportion of positive predictions that are '
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376 'correct (TP / (TP + FP)). Use when false positives are costly, e.g., spam detection.</p>'
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377 ' <p><strong>Recall (Sensitivity):</strong> Proportion of actual positives '
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378 'correctly predicted (TP / (TP + FN)). Use when missing positives is risky, '
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379 'e.g., disease detection.</p>'
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380 ' <p><strong>Specificity:</strong> True negative rate (TN / (TN + FP)). '
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381 'Measures ability to identify negatives. Useful in medical testing to avoid '
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382 'false alarms.</p>'
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383 ' <h3>4) Classification: Macro, Micro, and Weighted Averages</h3>'
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384 ' <p><strong>Macro Precision / Recall / F1:</strong> Averages the metric '
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diff changeset
385 'across all classes, treating each equally. Best for balanced datasets where '
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386 'all classes are equally important.</p>'
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387 ' <p><strong>Micro Precision / Recall / F1:</strong> Aggregates true positives, '
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388 'false positives, and false negatives across all classes before computing. '
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389 'Ideal for imbalanced or multilabel classification.</p>'
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390 ' <p><strong>Weighted Precision / Recall / F1:</strong> Averages metrics '
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diff changeset
391 'across classes, weighted by the number of true instances per class. Balances '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
parents: 2
diff changeset
392 'class importance based on frequency.</p>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
parents: 2
diff changeset
393 ' <h3>5) Classification: Average Precision (PR-AUC Variants)</h3>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
parents: 2
diff changeset
394 ' <p><strong>Average Precision Macro:</strong> Precision-Recall AUC averaged '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
395 'equally across classes. Use for balanced multiclass problems.</p>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
parents: 2
diff changeset
396 ' <p><strong>Average Precision Micro:</strong> Global Precision-Recall AUC '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
397 'using all instances. Best for imbalanced or multilabel classification.</p>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
parents: 2
diff changeset
398 ' <p><strong>Average Precision Samples:</strong> Precision-Recall AUC averaged '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
399 'across individual samples. Ideal for multilabel tasks where samples have multiple '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
400 'labels.</p>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
parents: 2
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401 ' <h3>6) Classification: ROC-AUC Variants</h3>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
parents: 2
diff changeset
402 ' <p><strong>ROC-AUC:</strong> Measures ability to distinguish between classes. '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
parents: 2
diff changeset
403 'AUC = 1 is perfect; 0.5 is random guessing. Use for binary classification.</p>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
parents: 2
diff changeset
404 ' <p><strong>Macro ROC-AUC:</strong> Averages AUC across all classes equally. '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
parents: 2
diff changeset
405 'Suitable for balanced multiclass problems.</p>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
parents: 2
diff changeset
406 ' <p><strong>Micro ROC-AUC:</strong> Computes AUC from aggregated predictions '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
407 'across all classes. Useful for imbalanced or multilabel settings.</p>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
parents: 2
diff changeset
408 ' <h3>7) Classification: Confusion Matrix Stats (Per Class)</h3>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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409 ' <p><strong>True Positives / Negatives (TP / TN):</strong> Correct predictions '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
410 'for positives and negatives, respectively.</p>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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411 ' <p><strong>False Positives / Negatives (FP / FN):</strong> Incorrect predictions '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
412 '— false alarms and missed detections.</p>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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413 ' <h3>8) Classification: Ranking Metrics</h3>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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414 ' <p><strong>Hits at K:</strong> Measures whether the true label is among the '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
415 'top-K predictions. Common in recommendation systems and retrieval tasks.</p>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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416 ' <h3>9) Other Metrics (Classification)</h3>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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417 ' <p><strong>Cohen\'s Kappa:</strong> Measures agreement between predicted and '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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418 'actual labels, adjusted for chance. Useful for multiclass classification with '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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419 'imbalanced data.</p>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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420 ' <p><strong>Matthews Correlation Coefficient (MCC):</strong> Balanced measure '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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421 'using TP, TN, FP, and FN. Effective for imbalanced datasets.</p>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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422 ' <h3>10) Metric Recommendations</h3>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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423 ' <ul>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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424 ' <li><strong>Regression:</strong> Use <strong>RMSE</strong> or '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
425 '<strong>MAE</strong> for general evaluation, <strong>MAPE</strong> for relative '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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426 'errors, and <strong>R²</strong> to assess model fit. Use <strong>MSE</strong> or '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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427 '<strong>RMSPE</strong> when large errors are critical.</li>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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428 ' <li><strong>Classification (Balanced Data):</strong> Use <strong>Accuracy</strong> '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
429 'and <strong>F1</strong> for overall performance.</li>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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430 ' <li><strong>Classification (Imbalanced Data):</strong> Use <strong>Precision</strong>, '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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431 '<strong>Recall</strong>, and <strong>ROC-AUC</strong> to focus on minority class '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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432 'performance.</li>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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433 ' <li><strong>Multilabel or Imbalanced Classification:</strong> Use '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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434 '<strong>Micro Precision/Recall/F1</strong> or <strong>Micro ROC-AUC</strong>.</li>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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435 ' <li><strong>Balanced Multiclass:</strong> Use <strong>Macro Precision/Recall/F1</strong> '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
436 'or <strong>Macro ROC-AUC</strong>.</li>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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437 ' <li><strong>Class Frequency Matters:</strong> Use <strong>Weighted Precision/Recall/F1</strong> '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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438 'to account for class imbalance.</li>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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439 ' <li><strong>Recommendation/Ranking:</strong> Use <strong>Hits at K</strong> for retrieval tasks.</li>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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440 ' <li><strong>Detailed Analysis:</strong> Use <strong>Confusion Matrix stats</strong> '
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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441 'for class-wise performance in classification.</li>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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442 ' </ul>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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443 ' </div>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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444 ' </div>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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445 '</div>'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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446 )
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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447 modal_css = (
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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448 "<style>"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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449 ".modal {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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450 " display: none;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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451 " position: fixed;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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452 " z-index: 1;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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453 " left: 0;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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454 " top: 0;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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455 " width: 100%;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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456 " height: 100%;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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457 " overflow: auto;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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458 " background-color: rgba(0,0,0,0.4);"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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459 "}"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
460 ".modal-content {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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461 " background-color: #fefefe;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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462 " margin: 15% auto;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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463 " padding: 20px;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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464 " border: 1px solid #888;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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465 " width: 80%;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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466 " max-width: 800px;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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467 "}"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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468 ".close {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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469 " color: #aaa;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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470 " float: right;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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471 " font-size: 28px;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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472 " font-weight: bold;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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473 "}"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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474 ".close:hover,"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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475 ".close:focus {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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476 " color: black;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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477 " text-decoration: none;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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478 " cursor: pointer;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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479 "}"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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480 ".metrics-guide h3 {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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481 " margin-top: 20px;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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482 "}"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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483 ".metrics-guide p {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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484 " margin: 5px 0;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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485 "}"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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486 ".metrics-guide ul {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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487 " margin: 10px 0;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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488 " padding-left: 20px;"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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489 "}"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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490 "</style>"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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491 )
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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492 modal_js = (
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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493 "<script>"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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494 'document.addEventListener("DOMContentLoaded", function() {'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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495 ' var modal = document.getElementById("metricsHelpModal");'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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496 ' var openBtn = document.getElementById("openMetricsHelp");'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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497 ' var span = document.getElementsByClassName("close")[0];'
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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498 " if (openBtn && modal) {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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499 " openBtn.onclick = function() {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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500 " modal.style.display = \"block\";"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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501 " };"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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502 " }"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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503 " if (span && modal) {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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504 " span.onclick = function() {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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505 " modal.style.display = \"none\";"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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506 " };"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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507 " }"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
goeckslab
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diff changeset
508 " window.onclick = function(event) {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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509 " if (event.target == modal) {"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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diff changeset
510 " modal.style.display = \"none\";"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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511 " }"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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512 " }"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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513 "});"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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514 "</script>"
85e6f4b2ad18 planemo upload for repository https://github.com/goeckslab/gleam.git commit 8a42eb9b33df7e1df5ad5153b380e20b910a05b6
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515 )
2
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516 return modal_css + modal_html + modal_js