diff ludwig_experiment.xml @ 8:0ee0bc6736a2 draft default tip

planemo upload for repository https://github.com/goeckslab/Galaxy-Ludwig.git commit e2ab4c0f9ce8b7a0a48f749ef5dd9899d6c2b1f8
author goeckslab
date Sat, 22 Nov 2025 01:17:09 +0000
parents 4d0d8859a0f2
children
line wrap: on
line diff
--- a/ludwig_experiment.xml	Sat Sep 06 01:53:23 2025 +0000
+++ b/ludwig_experiment.xml	Sat Nov 22 01:17:09 2025 +0000
@@ -125,6 +125,7 @@
         <data format="html" name="output_report" from_work_dir="ludwig_experiment_report.html" label="${tool.name} report on ${on_string}" />
         <collection type="list" name="output_pred_csv" label="${tool.name} predictions CSVs/experiment stats on ${on_string}" >
             <discover_datasets pattern="(?P&lt;designation&gt;predictions_parquet\.csv)" format="csv" directory="experiment_run" />
+            <discover_datasets pattern="(?P&lt;designation&gt;feature_importance)\.csv" format="csv" directory="experiment_run" />
             <discover_datasets pattern="(?P&lt;designation&gt;.+)\.json" format="json" directory="experiment_run" />
         </collection>
     </outputs>
@@ -147,6 +148,23 @@
                 </element>
             </output_collection>
         </test>
+        <test expect_num_outputs="3">
+            <param name="dataset" value="breast_sample.csv" ftype="csv" />
+            <param name="config" value="breast_config.yml" ftype="yaml" />
+            <param name="data_format" value="csv" />
+            <output name="output_report" file="ludwig_experiment_report_test_breast.html" compare="sim_size" delta="20000" >
+                <assert_contents>
+                    <has_text text="Feature Importance" />
+                </assert_contents>
+            </output>
+            <output_collection name="output_pred_csv" type="list">
+                <element name="predictions_parquet.csv">
+                    <assert_contents>
+                        <has_n_columns n="1" />
+                    </assert_contents>
+                </element>
+            </output_collection>
+        </test>
     </tests>
     <help>
         <![CDATA[