Mercurial > repos > goeckslab > pycaret_predict
annotate Dockerfile @ 6:a32ff7201629 draft
planemo upload for repository https://github.com/goeckslab/gleam commit 06c0da44ac93256dfb616a6b40276b5485a71e8e
| author | goeckslab |
|---|---|
| date | Wed, 02 Jul 2025 19:00:03 +0000 |
| parents | ccd798db5abb |
| children |
| rev | line source |
|---|---|
|
3
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
1 FROM python:3.11-slim |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
2 |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
3 ARG VERSION=3.3.2 |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
4 |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
5 # Install necessary dependencies, including libgomp1 |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
6 RUN apt-get update && \ |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
7 apt-get install -y --no-install-recommends git unzip libgomp1 && \ |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
8 rm -rf /var/lib/apt/lists/* |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
9 |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
10 # Install Python packages |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
11 RUN pip install -U pip && \ |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
12 pip install --no-cache-dir --no-compile joblib && \ |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
13 pip install --no-cache-dir --no-compile h5py && \ |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
14 pip install --no-cache-dir --no-compile pycaret[analysis,models]==${VERSION} && \ |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
15 pip install --no-cache-dir --no-compile explainerdashboard |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
16 |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
17 # Clean up unnecessary packages |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
18 RUN apt-get -y autoremove && apt-get clean && \ |
|
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
diff
changeset
|
19 rm -rf /var/lib/apt/lists/* |
