Mercurial > repos > goeckslab > pycaret_predict
annotate Dockerfile @ 12:e674b9e946fb draft default tip
planemo upload for repository https://github.com/goeckslab/gleam commit 1594d503179f28987720594eb49b48a15486f073
| author | goeckslab | 
|---|---|
| date | Mon, 08 Sep 2025 22:39:12 +0000 | 
| parents | ccd798db5abb | 
| children | 
| rev | line source | 
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| 3 
ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 1 FROM python:3.11-slim | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 2 | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 3 ARG VERSION=3.3.2 | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 4 | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 5 # Install necessary dependencies, including libgomp1 | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 6 RUN apt-get update && \ | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 7 apt-get install -y --no-install-recommends git unzip libgomp1 && \ | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 8 rm -rf /var/lib/apt/lists/* | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 9 | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 10 # Install Python packages | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 11 RUN pip install -U pip && \ | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 12 pip install --no-cache-dir --no-compile joblib && \ | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 13 pip install --no-cache-dir --no-compile h5py && \ | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 14 pip install --no-cache-dir --no-compile pycaret[analysis,models]==${VERSION} && \ | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 15 pip install --no-cache-dir --no-compile explainerdashboard | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 16 | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 17 # Clean up unnecessary packages | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 18 RUN apt-get -y autoremove && apt-get clean && \ | 
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ccd798db5abb
planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
 goeckslab parents: diff
changeset | 19 rm -rf /var/lib/apt/lists/* | 
