Mercurial > repos > goeckslab > scimap_phenotyping
diff test-data/phenotype_workflow.csv @ 0:7ed4b55b11f7 draft
planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit b19cb55dfb751cccc857b95a432890299bfeebb5
| author | goeckslab |
|---|---|
| date | Tue, 19 Jul 2022 20:29:22 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/phenotype_workflow.csv Tue Jul 19 20:29:22 2022 +0000 @@ -0,0 +1,23 @@ +,,ASMA,CD163,CD206,CD68,CD20,CD21,CD3D,CD45,CD56,CD8A,FOXP3,CD11B,CD11C,CD15,CD4,PD1,HLADR,CD25 +all,Other Immune cells,,,,,,,,pos,,,,,,,,,, +all,ASMA+ cells,pos,,,,,,,,,,,,,,,,, +Other Immune cells,T cells,,,,,,,pos,,,,,,,,,,, +Other Immune cells,B cells,,,,,pos,,,,,,,,,,,,, +Other Immune cells,Myeloid Lineage,,anypos,anypos,anypos,,,,,,,,anypos,anypos,,,,, +Other Immune cells,NK cells,,,,,,,,,pos,,,,,,,,, +Other Immune cells,Granulocytes,,,,,,,,,,,,,,pos,,,, +Myeloid Lineage,T cells,,,,,,,pos,,,,,,,,,,, +Myeloid Lineage,B cells,,,,,pos,,,,,,,,,,,,, +Myeloid Lineage,NK cells,,,,,,,,,pos,,,,,,,,, +Myeloid Lineage,Granulocytes,,,,,,,,,,,,,,pos,,,, +T cells,CD4 T cells,,,,,,,,,,,,,,,pos,,, +T cells,CD8 T cells,,,,,,,,,,pos,,,,,,,, +CD4 T cells,Regulatory T cells,,,,,,,,,,,pos,,,,,,, +CD4 T cells,Follicular Helper T cells,,,,,,,,,,,,,,,,pos,, +CD8 T cells,PD1+ T cells,,,,,,,,,,,,,,,,pos,, +Myeloid Lineage,CD68+ Macrophages,,,,pos,,,,,,,,,,,,,, +Myeloid Lineage,M2 Macrophages,,anypos,anypos,,,,,,,,,,,,,,, +Myeloid Lineage,Myeloid Dendritic cells,,,,,,,,,,,,,,,,,pos, +Myeloid Lineage,Follicular Dendritic cells,,,,,,pos,,,,,,,,,,,, +CD68+ Macrophages,M1 Macrophages,,,,,,,,,,,,,,,,,pos, +Myeloid Dendritic cells,CD25+ Dendritic cells,,,,,,,,,,,,,,,,,,pos \ No newline at end of file