comparison vitessce_spatial.py @ 7:cab38f254824 draft default tip

planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/vitessce commit 52576a03742abfab8a623c06e22624f1d8423e3d

6:70c8be4d59e9

        dataset=dataset,
        w=lc_dims[0],
        h=lc_dims[1])

    # Build the prefix that Vitessce should use
    display_prefix = (f"{galaxy_url}/api/datasets/{dataset_id}/display?filename=")

    # if no anndata file, export the config with these minimal components
    if not anndata:
        vc.layout(lc | spatial)
        config_dict = vc.export(

7:cab38f254824

        dataset=dataset,
        w=lc_dims[0],
        h=lc_dims[1])

    # Build the prefix that Vitessce should use
    display_prefix = f"{galaxy_url}/api/datasets/{dataset_id}/extra_files/raw"

    # if no anndata file, export the config with these minimal components
    if not anndata:
        vc.layout(lc | spatial)
        config_dict = vc.export(