comparison range2tag.py @ 2:7d4ec8f51253 draft

planemo upload for repository https://github.com/gpovysil/galaxy/tools/range2tag commit 24aafe8e14a7e61886d9361efe9fbf5ea59c4294
author gpovysil
date Wed, 16 May 2018 09:26:43 -0400
parents 0b486eaca66e
children e66e151e07ab
comparison
equal deleted inserted replaced
1:24d6b738df6e 2:7d4ec8f51253
83 start_pos = start_pos - 3 83 start_pos = start_pos - 3
84 stop_pos = stop_pos + 3 84 stop_pos = stop_pos + 3
85 mut_tags = None 85 mut_tags = None
86 for t in range(0, len(tags)): 86 for t in range(0, len(tags)):
87 c_split = re.split('([A-Z])', cigar[t]) 87 c_split = re.split('([A-Z])', cigar[t])
88 print(c_split)
88 cigar_long = None 89 cigar_long = None
89 90
90 for i in range(1, len(c_split), 2): 91 for i in range(1, len(c_split), 2):
91 if cigar_long is None: 92 if cigar_long is None:
92 cigar_long = np.repeat(c_split[i], c_split[i - 1]) 93 cigar_long = np.repeat(c_split[i], c_split[i - 1])