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1 #contig start stop name type drug note
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2 chromosome 6843 6862 gyrA QRDR snp quinolone gyrA QRDR mutation is the most common quinolone resistance mutation. It has not been observed in naturally occuring isolates.
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3 chromosome 5664 6166 gyrB QRDR snp quinolone gyrB QRDR mutation is less a less common quinolone resistance mutation. It has not been observed in naturally occuring isolates.
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4 chromosome 124092 124443 rplV any macrolide rplV alteration has been associated with macrolide resistance.
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5 chromosome 3365449 3365459 parC QRDR 1 snp quinolone parC QRDR mutation is less a less common quinolone resistance mutation. It has not been observed in naturally occuring isolates.
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6 chromosome 3365231 3365648 parC QRDR 2 snp quinolone parC QRDR mutation is less a less common quinolone resistance mutation. It has not been observed in naturally occuring isolates.
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7 chromosome 3366159 3366605 parE QRDR snp quinolone parE QRDR mutation is less a less common quinolone resistance mutation. It has not been observed in naturally occuring isolates.
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8 chromosome 842403 842981 tetR any quinolone terR inactivation has been shown to confer quinolone resistance in a lab setting. It has not been observed in natually ocurring isolates.
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9 chromosome 2323274 2323294 rsip poly-A any beta-lactam rsiP inactivation has been shown to confer penicillin resistance in a lab setting. It has not been observed in naturally ocurring isolates.
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10 chromosome 2323269 2324096 rsip broad-gene any beta-lactam rsiP inactivation has been shown to confer penicillin resistance in a lab setting. It has not been observed in naturally ocurring isolates.
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11 chromosome 2421872 2421877 abc-f poly-A indel lincosamide Restoration of the abc-f ORF has been associated with lincosamide resistance in a lab setting. It has not been observed in naturally ocurring isolates.
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12 chromosome 9307 10861 16S.1 point NA NA
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13 chromosome 11230 14158 23S.1 point NA NA
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14 chromosome 14203 14318 5S.1 point NA NA
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15 chromosome 29101 30655 16S.2 point NA NA
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16 chromosome 31024 33952 23S.2 point NA NA
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17 chromosome 33997 34112 5S.2 point NA NA
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18 chromosome 82423 83977 16S.3 point NA NA
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19 chromosome 84119 87047 23S.3 point NA NA
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20 chromosome 87093 87208 5S.3 point NA NA
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21 chromosome 145487 147041 16S.4 point NA NA
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22 chromosome 147183 150111 23S.4 point NA NA
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23 chromosome 150194 150309 5S.4 point NA NA
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24 chromosome 246207 247761 16S.5 point NA NA
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25 chromosome 247903 250831 23S.5 point NA NA
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26 chromosome 250877 250992 5S.5 point NA NA
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27 chromosome 266786 268340 16S.6 point NA NA
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28 chromosome 268482 271410 23S.6 point NA NA
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29 chromosome 271456 271571 5S.6 point NA NA
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30 chromosome 280084 281638 16S.7 point NA NA
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31 chromosome 281780 284708 23S.7 point NA NA
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32 chromosome 284755 284870 5S.7 point NA NA
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33 chromosome 290057 291611 16S.8 point NA NA
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34 chromosome 291753 294681 23S.8 point NA NA
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35 chromosome 294728 294843 5S.8 point NA NA
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36 chromosome 532435 533988 16S.9 point NA NA
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37 chromosome 534123 537051 23S.9 point NA NA
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38 chromosome 537148 537263 5S.9 point NA NA
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39 chromosome 741537 743091 16S.10 point NA NA
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40 chromosome 743233 746161 23S.10 point NA NA
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41 chromosome 746259 746374 5S.10 point NA NA
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42 chromosome 4652034 4652149 5S.11 point NA NA
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43 chromosome 4652247 4655175 23S.11 point NA NA
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44 chromosome 4655317 4656870 16S.11 point NA NA
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