Mercurial > repos > greg > call_amr_mutations
view test-data/output1.vcf @ 2:a2fe87395f74 draft
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| author | greg |
|---|---|
| date | Mon, 20 Feb 2023 21:10:42 +0000 |
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#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT SAMPLE chromosome 6848 . C T 0 PASS . GT 1|1 chromosome 28975 . G A 0 PASS . GT 1|1 chromosome 64632 . T C 0 PASS . GT 1|1 chromosome 73738 . T C 0 PASS . GT 1|1 chromosome 122896 . G A 0 PASS . GT 1|1 chromosome 171823 . C T 0 PASS . GT 1|1 chromosome 182106 . C T 0 PASS . GT 1|1 chromosome 200731 . C T 0 PASS . GT 1|1 chromosome 240050 . T C 0 PASS . GT 1|1 chromosome 243867 . C T 0 PASS . GT 1|1 chromosome 245190 . C T 0 PASS . GT 1|1 chromosome 274236 . C A 0 PASS . GT 1|1 chromosome 318187 . C T 0 PASS . GT 1|1 chromosome 337241 . T C 0 PASS . GT 1|1 chromosome 359536 . G A 0 PASS . GT 1|1 chromosome 387637 . G A 0 PASS . GT 1|1 chromosome 433277 . G T 0 PASS . GT 1|1 chromosome 513052 . C T 0 PASS . GT 1|1 chromosome 521963 . A G 0 PASS . GT 1|1 chromosome 571199 . G A 0 PASS . GT 1|1 chromosome 644625 . T C 0 PASS . GT 1|1 chromosome 665308 . T C 0 PASS . GT 1|1 chromosome 692932 . C T 0 PASS . GT 1|1 chromosome 702761 . G C 0 PASS . GT 1|1 chromosome 732173 . A T 0 PASS . GT 1|1 chromosome 765499 . A C 0 PASS . GT 1|1 chromosome 789298 . G A 0 PASS . GT 1|1 chromosome 814684 . T G 0 PASS . GT 1|1 chromosome 1023150 . A G 0 PASS . GT 1|1 chromosome 1120096 . C T 0 PASS . GT 1|1 chromosome 1131906 . T C 0 PASS . GT 1|1 chromosome 1181950 . A G 0 PASS . GT 1|1 chromosome 1184347 . G A 0 PASS . GT 1|1 chromosome 1223198 . C T 0 PASS . GT 1|1 chromosome 1270555 . G T 0 PASS . GT 1|1 chromosome 1306861 . C T 0 PASS . GT 1|1 chromosome 1385721 . G A 0 PASS . GT 1|1 chromosome 1406212 . C T 0 PASS . GT 1|1 chromosome 1423420 . A G 0 PASS . GT 1|1 chromosome 1592398 . C A 0 PASS . GT 1|1 chromosome 1621512 . C A 0 PASS . GT 1|1 chromosome 1631941 . G T 0 PASS . GT 1|1 chromosome 1728049 . G A 0 PASS . GT 1|1 chromosome 1774177 . C T 0 PASS . GT 1|1 chromosome 1797708 . T C 0 PASS . GT 1|1 chromosome 1798769 . G T 0 PASS . GT 1|1 chromosome 1867996 . T C 0 PASS . GT 1|1 chromosome 1982986 . C T 0 PASS . GT 1|1 chromosome 2067935 . G A 0 PASS . GT 1|1 chromosome 2133680 . G T 0 PASS . GT 1|1 chromosome 2371243 . T C 0 PASS . GT 1|1 chromosome 2423657 . A G 0 PASS . GT 1|1 chromosome 2749671 . A G 0 PASS . GT 1|1 chromosome 2834318 . G A 0 PASS . GT 1|1 chromosome 2956135 . G A 0 PASS . GT 1|1 chromosome 2989856 . G A 0 PASS . GT 1|1 chromosome 3038888 . T C 0 PASS . GT 1|1 chromosome 3163858 . A G 0 PASS . GT 1|1 chromosome 3306423 . C T 0 PASS . GT 1|1 chromosome 3364887 . G A 0 PASS . GT 1|1 chromosome 3382079 . C T 0 PASS . GT 1|1 chromosome 3460779 . T C 0 PASS . GT 1|1 chromosome 3568849 . A G 0 PASS . GT 1|1 chromosome 3696168 . C T 0 PASS . GT 1|1 chromosome 3712048 . T C 0 PASS . GT 1|1 chromosome 3739850 . A G 0 PASS . GT 1|1 chromosome 3758015 . A G 0 PASS . GT 1|1 chromosome 3841816 . G A 0 PASS . GT 1|1 chromosome 4035203 . T C 0 PASS . GT 1|1 chromosome 4145299 . C T 0 PASS . GT 1|1 chromosome 4147376 . C T 0 PASS . GT 1|1 chromosome 4158968 . C T 0 PASS . GT 1|1 chromosome 4212929 . G T 0 PASS . GT 1|1 chromosome 4232753 . C T 0 PASS . GT 1|1 chromosome 4345557 . T A 0 PASS . GT 1|1 chromosome 4456896 . G A 0 PASS . GT 1|1 chromosome 4501001 . G A 0 PASS . GT 1|1 chromosome 4519053 . A G 0 PASS . GT 1|1 chromosome 4519433 . C A 0 PASS . GT 1|1 chromosome 4698084 . T C 0 PASS . GT 1|1 chromosome 4929312 . T G 0 PASS . GT 1|1 chromosome 4951610 . G A 0 PASS . GT 1|1 chromosome 5040523 . C T 0 PASS . GT 1|1 chromosome 5077771 . G A 0 PASS . GT 1|1 chromosome 5140491 . G A 0 PASS . GT 1|1 chromosome 5157810 . G A 0 PASS . GT 1|1 pXO1 7452 . C T 0 PASS . GT 1|1 pXO1 28077 . G A 0 PASS . GT 1|1 pXO1 55874 . A T 0 PASS . GT 1|1 pXO1 77518 . A G 0 PASS . GT 1|1 pXO1 141921 . T G 0 PASS . GT 1|1 pXO1 141922 . T A 0 PASS . GT 1|1 pXO1 141923 . T A 0 PASS . GT 1|1 pXO1 150892 . C A 0 PASS . GT 1|1