# HG changeset patch
# User greg
# Date 1679427145 0
# Node ID 2774bdf30122af04093bc44cb1de6bac958ca3b6
# Parent  30b17a17c1aac323912775c8acea97bab48ec447
Uploaded

diff -r 30b17a17c1aa -r 2774bdf30122 call_amr_mutations.xml
--- a/call_amr_mutations.xml	Tue Mar 21 19:26:55 2023 +0000
+++ b/call_amr_mutations.xml	Tue Mar 21 19:32:25 2023 +0000
@@ -5,10 +5,7 @@
     </macros>
     <expand macro="requirements"/>
     <command detect_errors="exit_code"><![CDATA[
-## NOTE: This tool provides the functionality of the PIMA filter_varsacn()
-## function here https://github.com/appliedbinf/pima_md/blob/main/pima.py#L3012
-
-python '$__tool_directory__/filter_varscan.py'
+python '$__tool_directory__/call_amr_mutations.py'
 --varscan_raw '$varscan_raw'
 --output '$output'
 ]]></command>