comparison tool-data/all_fasta.loc.sample @ 0:be8994ce4fb6 draft

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author greg
date Thu, 12 Oct 2023 19:55:24 +0000
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1 #This file lists the locations and dbkeys of all the fasta files
2 #under the tool-data/genome directory (a directory that contains a directory
3 #for each build). This file has the format (white space characters are
4 #TAB characters):
5 #
6 #<unique_build_id> <dbkey> <display_name> <file_path>
7 #
8 #So, all_fasta.loc could look something like this:
9 #
10 #apiMel3 apiMel3 Honeybee (Apis mellifera): apiMel3 /path/to/genome/apiMel3/apiMel3.fa
11 #hg19canon hg19 Human (Homo sapiens): hg19 Canonical /path/to/genome/hg19/hg19canon.fa
12 #hg19full hg19 Human (Homo sapiens): hg19 Full /path/to/genome/hg19/hg19full.fa
13 #
14 #Your all_fasta.loc file should contain an entry for each individual
15 #fasta file.