Mercurial > repos > greg > cfsan_snp_pipeline_map_reads

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author greg
date Thu, 23 Nov 2023 18:29:30 +0000
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1 name: cfsan_snp_pipeline_map_reads
2 owner: greg
3 description: Align the sequence reads for a specified sample to a specified reference genome
4 long_description: Align the sequence reads for a specified sample to a specified reference genome
5 The reads are sorted, duplicates marked, and realigned around indels.
6 categories:
7 - Metagenomics
8 remote_repository_url: https://github.com/gregvonkuster/galaxy_tools/tree/master/snp_pipeline/cfsan_snp_pipeline_map_reads
9 homepage_url: https://github.com/gregvonkuster/galaxy_tools
10 type: unrestricted