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author greg
date Thu, 23 Nov 2023 18:36:23 +0000
parents e589aadb5a80
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name: cfsan_snp_pipeline_map_reads
owner: greg
description: Align the sequence reads for a specified sample to a specified reference genome
long_description: Align the sequence reads for a specified sample to a specified reference genome
  The reads are sorted, duplicates marked, and realigned around indels.
categories: 
- Metagenomics
remote_repository_url: https://github.com/gregvonkuster/galaxy_tools/tree/master/snp_pipeline/cfsan_snp_pipeline_map_reads
homepage_url: https://github.com/gregvonkuster/galaxy_tools
type: unrestricted