Mercurial > repos > greg > cfsan_snp_pipeline_merge_vcfs
comparison macros.xml @ 0:e958c5f7c9d1 draft
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author | greg |
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date | Wed, 22 Nov 2023 15:34:14 +0000 |
parents | |
children | ab24883161d3 |
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-1:000000000000 | 0:e958c5f7c9d1 |
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1 <macros> | |
2 <token name="@TOOL_VERSION@">2.2.1</token> | |
3 <token name="@VERSION_SUFFIX@">0</token> | |
4 <token name="@PROFILE@">21.01</token> | |
5 <xml name="requirements"> | |
6 <requirements> | |
7 <requirement type="package" version="1.18">bcftools</requirement> | |
8 <requirement type="package" version="3.11.5">python</requirement> | |
9 <requirement type="package" version="@TOOL_VERSION@">snp-pipeline</requirement> | |
10 <requirement type="package" version="1.11">tabix</requirement> | |
11 </requirements> | |
12 </xml> | |
13 <xml name="input_type_cond"> | |
14 <conditional name="input_type_cond"> | |
15 <param name="input_type" type="select" label="Choose the category for the files to be analyzed"> | |
16 <option value="single" selected="true">Single files</option> | |
17 <option value="collection">Collection of files</option> | |
18 </param> | |
19 <when value="single"> | |
20 <param name="input_vcf" type="data" format="vcf" label="VCF file"/> | |
21 </when> | |
22 <when value="collection"> | |
23 <param name="input_vcf_collection" type="data_collection" format="vcf" collection_type="list" label="Collection of VCF files"/> | |
24 </when> | |
25 </conditional> | |
26 </xml> | |
27 <xml name="citations"> | |
28 <citations> | |
29 <citation type="doi">10.7717/peerj-cs.20</citation> | |
30 </citations> | |
31 </xml> | |
32 </macros> | |
33 |