Mercurial > repos > greg > cfsan_snp_pipeline_merge_vcfs
diff macros.xml @ 0:e958c5f7c9d1 draft
Uploaded
author | greg |
---|---|
date | Wed, 22 Nov 2023 15:34:14 +0000 |
parents | |
children | ab24883161d3 |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/macros.xml Wed Nov 22 15:34:14 2023 +0000 @@ -0,0 +1,33 @@ +<macros> + <token name="@TOOL_VERSION@">2.2.1</token> + <token name="@VERSION_SUFFIX@">0</token> + <token name="@PROFILE@">21.01</token> + <xml name="requirements"> + <requirements> + <requirement type="package" version="1.18">bcftools</requirement> + <requirement type="package" version="3.11.5">python</requirement> + <requirement type="package" version="@TOOL_VERSION@">snp-pipeline</requirement> + <requirement type="package" version="1.11">tabix</requirement> + </requirements> + </xml> + <xml name="input_type_cond"> + <conditional name="input_type_cond"> + <param name="input_type" type="select" label="Choose the category for the files to be analyzed"> + <option value="single" selected="true">Single files</option> + <option value="collection">Collection of files</option> + </param> + <when value="single"> + <param name="input_vcf" type="data" format="vcf" label="VCF file"/> + </when> + <when value="collection"> + <param name="input_vcf_collection" type="data_collection" format="vcf" collection_type="list" label="Collection of VCF files"/> + </when> + </conditional> + </xml> + <xml name="citations"> + <citations> + <citation type="doi">10.7717/peerj-cs.20</citation> + </citations> + </xml> +</macros> +