Mercurial > repos > greg > cfsan_snp_pipeline_snp_matrix
comparison macros.xml @ 1:f3485a9e51a3 draft
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author | greg |
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date | Wed, 22 Nov 2023 20:04:57 +0000 |
parents | 6b0a13deae92 |
children | 610251aac6ef |
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0:6b0a13deae92 | 1:f3485a9e51a3 |
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5 <xml name="requirements"> | 5 <xml name="requirements"> |
6 <requirements> | 6 <requirements> |
7 <requirement type="package" version="@TOOL_VERSION@">snp-pipeline</requirement> | 7 <requirement type="package" version="@TOOL_VERSION@">snp-pipeline</requirement> |
8 <requirement type="package" version="3.6.8">python</requirement> | 8 <requirement type="package" version="3.6.8">python</requirement> |
9 </requirements> | 9 </requirements> |
10 </xml> | |
11 <xml name="input_type_cond"> | |
12 <conditional name="input_type_cond"> | |
13 <param name="input_type" type="select" label="Choose the category for the files to be analyzed"> | |
14 <option value="single" selected="true">Single files</option> | |
15 <option value="collection">Collection of files</option> | |
16 </param> | |
17 <when value="single"> | |
18 <param name="input_fasta" type="data" format="fasta" label="FASTA file"/> | |
19 </when> | |
20 <when value="collection"> | |
21 <param name="input_fasta_collection" type="data_collection" format="fasta" collection_type="list" label="Collection of fasta files"/> | |
22 </when> | |
23 </conditional> | |
24 </xml> | 10 </xml> |
25 <xml name="reference_cond"> | 11 <xml name="reference_cond"> |
26 <conditional name="reference_cond"> | 12 <conditional name="reference_cond"> |
27 <param name="reference_source" type="select" label="Choose the source for the reference genome"> | 13 <param name="reference_source" type="select" label="Choose the source for the reference genome"> |
28 <option value="cached" selected="true">locally cached</option> | 14 <option value="cached" selected="true">locally cached</option> |