Mercurial > repos > greg > cfsan_snp_pipeline_snp_matrix
view tool-data/all_fasta.loc.sample @ 0:6b0a13deae92 draft
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author | greg |
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date | Fri, 13 Oct 2023 20:26:32 +0000 |
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#This file lists the locations and dbkeys of all the fasta files #under the tool-data/genome directory (a directory that contains a directory #for each build). This file has the format (white space characters are #TAB characters): # #<unique_build_id> <dbkey> <display_name> <file_path> # #So, all_fasta.loc could look something like this: # #apiMel3 apiMel3 Honeybee (Apis mellifera): apiMel3 /path/to/genome/apiMel3/apiMel3.fa #hg19canon hg19 Human (Homo sapiens): hg19 Canonical /path/to/genome/hg19/hg19canon.fa #hg19full hg19 Human (Homo sapiens): hg19 Full /path/to/genome/hg19/hg19full.fa # #Your all_fasta.loc file should contain an entry for each individual #fasta file.