comparison insect_phenology_model.xml @ 60:393085589438 draft

Uploaded

59:892cf703be62

    <inputs>
        <param name="input_norm" type="data" format="csv" label="30 year normals temperature data">
            <validator type="expression" message="30 year normals temperature data must have 10 columns and 366 rows">value is not None and value.metadata.columns==10 and value.metadata.data_lines==366</validator>
        </param>
        <conditional name="merge_ytd_temperature_data_cond">
            <param name="merge_ytd_temperature_data" type="select" label="Merge year-to-date temperature data with 30 year normals temperature data?">
                <option value="yes" selected="true">Yes</option>
                <option value="no">No</option>
            </param>
            <when value="yes">
                <param name="input_ytd" type="data" format="csv" label="Year-to-date temperature data">
                    <validator type="expression" message="Year-to-date temperature data must have 6 columns">value is not None and value.metadata.columns==6</validator>
                </param>
                <param name="location" type="text" value="" optional="true" label="Location" help="Enter the location or leave blank to use the station name from 30 year normals data."/>
            </when>
            <when value="no"/>
        </conditional>
        <param name="insect" type="select" label="Select insect">
            <option value="BMSB" selected="True">Brown Marmorated Stink Bug</option>
        </param>
        <param name="replications" type="integer" value="10" min="2" label="Number of replications"/>
        <param name="insects_per_replication" type="integer" value="1000" min="100" label="Number of insects with which to start each replication"/>
        <param name="photoperiod" type="float" value="13.5" min="0" label="Critical photoperiod for diapause induction/termination"/>
        <param name="egg_mortality" type="float" value="1" min="0" max="1" label="Adjustment rate for egg mortality" help="Floating point value between 0 and 1"/>
        <param name="nymph_mortality" type="float" value="1" min="0" label="Adjustment rate for nymph mortality"/>
        <param name="adult_mortality" type="float" value="1" min="0" label="Adjustment rate for adult mortality"/>

**Required options**

 * **30 year normals temperature data** - the dataset from your history containing the 30-year normals temperature data (available at http://pestwatch.psu.edu/ghcn).
 * **Merge year-to-date temperature data with 30 year normals temperature data** - select Yes to merge a year-to-date temperature dataset from your history into the selected 30 year normals temperature data.

  * **Year-to-date temperature data** - the dataset from your history containing the year-to-date temperature data (available at http://pestwatch.psu.edu/minmax).

 * **Location** - the location associated with the selected temperature data.
 * **Select insect** - currently only the Brown Marmorated Stink Bug can be analyzed.
 * **Number of replications** - number of replications.
 * **Number of insects with which to start each replication** - the analysis for each replication will start with this number of insects.

60:393085589438

    <inputs>
        <param name="input_norm" type="data" format="csv" label="30 year normals temperature data">
            <validator type="expression" message="30 year normals temperature data must have 10 columns and 366 rows">value is not None and value.metadata.columns==10 and value.metadata.data_lines==366</validator>
        </param>
        <conditional name="merge_ytd_temperature_data_cond">
            <param name="merge_ytd_temperature_data" type="select" label="Merge daily actuals temperature data with 30 year normals temperature data?">
                <option value="yes" selected="true">Yes</option>
                <option value="no">No</option>
            </param>
            <when value="yes">
                <param name="input_ytd" type="data" format="csv" label="Daily actuals temperature data">
                    <validator type="expression" message="Daily actuals temperature data must have 6 columns">value is not None and value.metadata.columns==6</validator>
                </param>
                <param name="location" type="text" value="" optional="true" label="Location" help="Enter the location or leave blank to use the station name from 30 year normals data."/>
            </when>
            <when value="no"/>
        </conditional>
        <param name="insect" type="select" label="Select insect">
            <option value="BMSB" selected="True">Brown Marmorated Stink Bug</option>
        </param>
        <param name="replications" type="integer" value="5" min="2" label="Number of replications"/>
        <param name="insects_per_replication" type="integer" value="1000" min="100" label="Number of insects with which to start each replication"/>
        <param name="photoperiod" type="float" value="13.5" min="0" label="Critical photoperiod for diapause induction/termination"/>
        <param name="egg_mortality" type="float" value="1" min="0" max="1" label="Adjustment rate for egg mortality" help="Floating point value between 0 and 1"/>
        <param name="nymph_mortality" type="float" value="1" min="0" label="Adjustment rate for nymph mortality"/>
        <param name="adult_mortality" type="float" value="1" min="0" label="Adjustment rate for adult mortality"/>

**Required options**

 * **30 year normals temperature data** - the dataset from your history containing the 30-year normals temperature data (available at http://pestwatch.psu.edu/ghcn).
 * **Merge year-to-date temperature data with 30 year normals temperature data** - select Yes to merge a year-to-date temperature dataset from your history into the selected 30 year normals temperature data.

  * **Daily actuals temperature data** - the dataset from your history containing the daily actuals temperature data (available at http://pestwatch.psu.edu/minmax).

 * **Location** - the location associated with the selected temperature data.
 * **Select insect** - currently only the Brown Marmorated Stink Bug can be analyzed.
 * **Number of replications** - number of replications.
 * **Number of insects with which to start each replication** - the analysis for each replication will start with this number of insects.