comparison p_chunks.xml @ 3:e6fc152a2462 draft default tip

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author greg
date Tue, 28 Mar 2023 14:17:59 +0000
parents 66c368ee50fe
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2:66c368ee50fe 3:e6fc152a2462
27 </inputs> 27 </inputs>
28 <outputs> 28 <outputs>
29 <data name="output_plasmids" format="tsv" label="${tool.name} on ${on_string} (plasmids)"/> 29 <data name="output_plasmids" format="tsv" label="${tool.name} on ${on_string} (plasmids)"/>
30 </outputs> 30 </outputs>
31 <tests> 31 <tests>
32 <!-- Tests are not possible due to file size requirements --> 32 <test>
33 <param name="plasmid_psl" value="input.psl" ftype="psl"/>
34 <param name="plasmid_database" value="input.blastdbn" ftype="blastdbn"/>
35 <output name="output_plasmids" value="output.tsv" ftype="tsv"/>
36 </test>
33 </tests> 37 </tests>
34 <help> 38 <help>
35 **What it does** 39 **What it does**
36 40
37 Accepts a PSL file and a BLAST database of the associated plasmid sequences and produces a tabular file containing query name, 41 Accepts a PSL file and a BLAST database of the associated plasmid sequences and produces a tabular file containing query name,