# HG changeset patch
# User greg
# Date 1680208878 0
# Node ID 4fe8c35cd176503c94ad2be6ab689e0e1b671381
# Parent  c509e6819795f53f36df4c8ca7fcab466995f11b
Uploaded

diff -r c509e6819795 -r 4fe8c35cd176 pima_report.py
--- a/pima_report.py	Thu Mar 30 20:35:32 2023 +0000
+++ b/pima_report.py	Thu Mar 30 20:41:18 2023 +0000
@@ -528,9 +528,9 @@
             for circos_file in self.circos_files:
                 contig = os.path.basename(circos_file)
                 contig_title = 'Alignment to %s' % contig
-                self.doc.new_line('Blue indicates aligned sequences (to the reference) and yellow indicates missing sequences')
                 self.doc.new_line()
                 self.doc.new_header(level=3, title=contig_title)
+                self.doc.new_line('Blue indicates aligned sequences (to the reference) and yellow indicates missing sequences')
                 self.doc.new_line(self.doc.new_inline_image(text='contig_title', path=os.path.abspath(circos_file)))
                 self.doc.new_line('<div style="page-break-after: always;"></div>')
                 self.doc.new_line()