# HG changeset patch # User greg # Date 1678384840 0 # Node ID 9213359bfda8f6bedf09997d6c2c989233e3442b # Parent b13d4c14caaa0fa2c0e1c0ffcf6420e6e5275da0 Uploaded diff -r b13d4c14caaa -r 9213359bfda8 pima_report.py --- a/pima_report.py Thu Mar 09 17:54:17 2023 +0000 +++ b/pima_report.py Thu Mar 09 18:00:40 2023 +0000 @@ -432,7 +432,7 @@ self.kraken_fracs['Taxa'] = self.kraken_fracs['Taxa'].str.lstrip() self.doc.new_line() self.doc.new_header(2, 'Contamination check') - for kraken_fracs in self.kraken_fracs.iteritems(): + for read_type, kraken_fracs in self.kraken_fracs.iteritems(): self.doc.new_line(self.read_type + ' classifications') self.doc.new_line() Table_List = ["Percent of Reads", "Reads", "Level", "Label"]